Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1191 ATGGAAAATCAATTCTTTTCAAACAATCATTTTGATCAATCACAACCATCTTCAATGCCTACATGGCAATCAATTTCATCAGAACAACAGAATCAAGATTGTTTTTACACACCAATAGATCAATGTGTTAATCAATTTGATTCAGCACTTAGTTCAATGGTATCATCACCTGCAGCTTCAAATTCCAACATGTCAAATGACAATTTTGTCATCAGAGAATTGATTGGTAAATTAGGAAACATTGGTAATTGTTCTGATGAGATCTCACAAACATTGGTTGCTGCAAATTCATATATCAATAGCAATAACAATACTTCATGTTACAATACCCCTTTGAATTCTCCTCCAAAATTGAACATCTCAACAATGGCCATGAATTCAACTGTTGCAGAATTCTCAACTGATCCTGGTTTTGCAGAAAGGGCTGCTAAATTTTCTTGCTTTGGAAGTAGGAGTTTCAATGGAAGAACAACTCAATTGAGTCAAAGTCAAAGATCTACTCCATTGTTGGAAAATGGAAAACTCTCTAGAGTTTCAAGTAGTCCATCATTGAAAGAACTTGGATCTCAATCTCAAATTGGTATACAAGAGAATATGAATTGTTCTACTCAATTGCAGGATCAAATTGAACTTAACAATTCTCAAGAAGAATCAACAATATCTGAAAATGGTGTGAAACCTTCTCCTTATGTGAATACAAGGAAAAGAAAAGTTTCTTCCAAAGGAAAAACCAAAGAAACTTCAACTTCTAGTAATCCTCCAATGGCTTGTGAAGCTGAAGACTCAAATGCAAAGCGCATGAAAACAAATGAAGGTGAAAAAATTGAAAATGGTAAAGTAAAAGCAGAGGATGAGTCAAAAGGGGGTACAAATAGTAATAATGGAGGTGATGAAAAACAGAATAAGAGCAATTCAAAACCTCCTGAGGCTCCAAAGGATTACATTCATGTCAGAGCAAGAAGAGGTCAAGCTACTGATAGCCATAGTCTTGCAGAAAGAGTTAGGAGGGAGAAAATCAGTGAAAGGATGAAGCTTCTACAAGATCTTGTCCCTGGTTGCAATAAGGTCACTGGAAAAGCACTCATGCTTGATGAAATTATAAACTATGTGCAATCATTGCAGCGTCAAGTTGAGTTCCTATCTATGAAATTGGCTACTGTTAACACAAGGGTGGATTTTAGTATTGAGAGTCTAATCTCAAAAGATATGTTTCAATCAAATAATTCCTTGGCACACCCAATATTCCCATTAGATTCCTCAGCACCATCCTATTATGGGCAACAACAGCAGCAAAACCCAGCAATTCACAATAACATTTCTAATGGAACTGTGACCCACAACTCAGTGGACCCATTAGATGGTGGTTTATGCCAAAACCTTGGCATGCACTTATCTTCACTAAGTGGATTTAATGAAGCTGGCTCACAGTATCCATTAACATTCTCTGAGGATGACCTCAACACAATTGTTCAGATGGGATTTGGACAAACTGACAATAGAAAAACACCAATACAATTTCAGAATTTGAACGGCACAAATCAACTACCCCTATGA 1554 0.3629 MENQFFSNNHFDQSQPSSMPTWQSISSEQQNQDCFYTPIDQCVNQFDSALSSMVSSPAASNSNMSNDNFVIRELIGKLGNIGNCSDEISQTLVAANSYINSNNNTSCYNTPLNSPPKLNISTMAMNSTVAEFSTDPGFAERAAKFSCFGSRSFNGRTTQLSQSQRSTPLLENGKLSRVSSSPSLKELGSQSQIGIQENMNCSTQLQDQIELNNSQEESTISENGVKPSPYVNTRKRKVSSKGKTKETSTSSNPPMACEAEDSNAKRMKTNEGEKIENGKVKAEDESKGGTNSNNGGDEKQNKSNSKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLATVNTRVDFSIESLISKDMFQSNNSLAHPIFPLDSSAPSYYGQQQQQNPAIHNNISNGTVTHNSVDPLDGGLCQNLGMHLSSLSGFNEAGSQYPLTFSEDDLNTIVQMGFGQTDNRKTPIQFQNLNGTNQLPL* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1191 517 PANTHER BHLH TRANSCRIPTION FACTOR 24 513 - -
Mtr7g1191 517 Gene3D - 320 394 IPR036638 GO:0046983
Mtr7g1191 517 SMART finulus 329 379 IPR011598 GO:0046983
Mtr7g1191 517 MobiDBLite consensus disorder prediction 214 228 - -
Mtr7g1191 517 CDD bHLH_AtBPE_like 313 398 - -
Mtr7g1191 517 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 321 392 IPR036638 GO:0046983
Mtr7g1191 517 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 24 513 IPR024097 GO:0006355
Mtr7g1191 517 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 323 373 IPR011598 GO:0046983
Mtr7g1191 517 MobiDBLite consensus disorder prediction 287 301 - -
Mtr7g1191 517 Pfam Helix-loop-helix DNA-binding domain 327 374 IPR011598 GO:0046983
Mtr7g1191 517 Coils Coil 370 390 - -
Mtr7g1191 517 MobiDBLite consensus disorder prediction 261 286 - -
Mtr7g1191 517 MobiDBLite consensus disorder prediction 157 189 - -
Mtr7g1191 517 MobiDBLite consensus disorder prediction 214 311 - -
Mtr7g1191 517 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1191 Mtr-Chr7 25258520 25262090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1191 1 483 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 43.625 3.92e-108 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mtr7g1191 HLH 4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1191 - - mtr:MTR_7g053410 1006.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1191 7 25258520 25262090 Mtr8g0306 8 3364256 3367942 PCT