Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1190 ATGCTCTTTTTCTTATCTTCAATTTTCTCAATAGCCTCATCAAGAAAAGGACCTTCCTCAAGCAACATAGATTGGTGGTGCAATTTAACACCACATCCTAAGCCATGCAAACACTACACAACACAAATGAACAATCACTTCAAAATCAAACATAGAGTTGAATTCAGGGAAATGCTTGTTAAATTAGCCTTAAACCAAGCTCTTACCATGCAAAAAGAAGCACAAGAAAATTCTCAACAACAACAAAACTCATCCGTGCATAAAACGGTTCATGCTGATTGTTTCAAGCTATTTGAAAACACAATTTTTCATCTCAACCATACACTTGAAGGCTTAAACAATGCAAGCAAAAATTGTTCACCGAATGATGTACAAACATGGCTCACAACTTCTCTCACAAATATTGAAACATGTAAAAGTGGAGCTTTAGAACTCAATGCTCAAGATTTCAATTTCATTATGCAAACCAATGTCATTGAGATGATAAGGAACATCTTAGCCATCAATATGCATTTCCTAAAACATAACAAAGGTAATACAGAAACAGAAGAAGGGTCATTTCCAAATTGGTTTTCTATGCATGAAAGGAAGCTTTTGCAGTCTAAGTCTCCAGTAAAGTACAATATTGTGGTGGCAAAAGATGGTTCTGGACAGTACAAGACTGTGCAAGCTGCTCTAAATGCTGCTGCTAAGAGAAAATATAAGACAAGGTTTGTGATACATGTGAAGAAAGGTGTTTATAAAGAGAACATTGAGGTTGCGGTTCACAATGATAACATTATGTTGGTTGGTGATGGGATGCAAAATACCATAATAACAAGTTCTAGAAGTGTTCAAGGTGGTTTTACCACTTATAGCTCTGCAACAGCAGGCATTGATGGACTTCATTTCATTGCCCGCGACATAACCTTCCAAAATACTGCTGGTCCTCATAAAGGTCAAGCTGTGGCGCTCCGATCAGCCTCAGATCTCTCTGTCTTCTACCGGTGTGCTATATCGGGCTACCAAGACACCCTTATGGCCCATGCGCAACGTCAATTTTACAGACAATGCTTCATCTATGGCACCGTCGACTTTATCTTTGGCAACGCCGCAGTAGTGTTCCAAAATTGTAACATTTTCGCAAGAAAGCCTTTAGATGGCCAAGCAAACATGATCACGGCCCAAGGTCGAGGTGACCCATTCCAAAACACTGGAATTTCATTCCACAATTGTCAAATTAAGGCTGCATCAGATCTAAAGCCTGTTGTTGACAAGTACAAAACCTTCTTGGGCAGGCCTTGGCAACAATATTCAAGAGTTATGGTGATGAAAACTTTTATGGACACTTTAGTGAGCCCCCTAGGTTGGTCTCCATGGGGTGACACTGATTTTGCTCAAGACACATTGTATTATGGCGAGTATGAGAATTATGGACCTGGTTCATCAACAGCAAATAGAGTAAAATGGCCTGGTTATCATGCGATAACAAACCCTAAGGAAGCATCAAAGTTTACGGTTGCTGGACTCATTACTGGACCAACATGGCTGGCTACAACTACTGTGCCATTTACATCTGGTCTTTGA 1566 0.3985 MLFFLSSIFSIASSRKGPSSSNIDWWCNLTPHPKPCKHYTTQMNNHFKIKHRVEFREMLVKLALNQALTMQKEAQENSQQQQNSSVHKTVHADCFKLFENTIFHLNHTLEGLNNASKNCSPNDVQTWLTTSLTNIETCKSGALELNAQDFNFIMQTNVIEMIRNILAINMHFLKHNKGNTETEEGSFPNWFSMHERKLLQSKSPVKYNIVVAKDGSGQYKTVQAALNAAAKRKYKTRFVIHVKKGVYKENIEVAVHNDNIMLVGDGMQNTIITSSRSVQGGFTTYSSATAGIDGLHFIARDITFQNTAGPHKGQAVALRSASDLSVFYRCAISGYQDTLMAHAQRQFYRQCFIYGTVDFIFGNAAVVFQNCNIFARKPLDGQANMITAQGRGDPFQNTGISFHNCQIKAASDLKPVVDKYKTFLGRPWQQYSRVMVMKTFMDTLVSPLGWSPWGDTDFAQDTLYYGEYENYGPGSSTANRVKWPGYHAITNPKEASKFTVAGLITGPTWLATTTVPFTSGL* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1190 521 ProSitePatterns Pectinesterase signature 2. 353 362 IPR033131 -
Mtr7g1190 521 PANTHER PECTINESTERASE 1 520 - -
Mtr7g1190 521 TIGRFAM PME_inhib: pectinesterase inhibitor domain 2 170 IPR006501 GO:0004857
Mtr7g1190 521 CDD PMEI-like_3 25 174 - -
Mtr7g1190 521 Pfam Pectinesterase 208 506 IPR000070 GO:0030599|GO:0042545
Mtr7g1190 521 Gene3D Invertase/pectin methylesterase inhibitor family protein 18 172 IPR035513 -
Mtr7g1190 521 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 21 169 IPR035513 -
Mtr7g1190 521 Gene3D - 202 521 IPR012334 -
Mtr7g1190 521 PANTHER PECTINESTERASE 1 520 - -
Mtr7g1190 521 SUPERFAMILY Pectin lyase-like 203 520 IPR011050 -
Mtr7g1190 521 SMART PMEI_2 18 168 IPR006501 GO:0004857
Mtr7g1190 521 Pfam Plant invertase/pectin methylesterase inhibitor 22 168 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1190 Mtr-Chr7 25230302 25235902 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1190 26 521 Carbohydrate Esterase AT5G51490 55.754 0.0 582