Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1181 ATGAAGTTCAACGTTGCGAATCCTACCACTGGATGCCAGAAGAAGCTTGAGATTGACGACGATCAGAAACTACGAGCATTTTGGGACAAGAGGATTTCACAAGAGGTCAATGGGGATGCTCTTGGTGAGGAATTTAAAGGATACGTTTTTAAAATCACCGGAGGTTGTGACAAACAAGGATTTCCAATGAAGCAGGGAGTCCTGACCCCTGGCCGTGTTCGTCTGTTGCTTCACAGGGGAACTCCTTGCTTTCGTGGACATGGAAGGCGTAATGGAGAGCGCAGGAGGAAGTCCGTTCGTGGGTGTATTGTTAGCCCAGACCTTTCTGTTCTGAACTTGGTAATTGTGAAGAAGGGTGAGAATGATTTACCCGGACTGACCGATGTTGAGAAGCCAAGGATGAGAGGTCCTAAGAGAGCGTCCAAGATCCGTAAGCTTTTCAACCTGTCTAAGGATGATGATGTGAGGAAGTATGTCAACACCTACCGTAGGACATTTACAACAAAAGATGGGAAAAAGGTGAGCAAAGCTCCCAAGATACAAAGACTAGTGACTCCTCTTACACTCCAAAGAAAGAGAGCAAGGATTGCCGATAAGAAAAAGAGAATCGCCAAGGCAAAATCAGAGGCAGCTGAGTACCAGAAGCTTCTTGCTTCCAGGTTGAAGGAGCAGAGAGAGCGTCGCAGTGAGAGTTTAGCAAAAAAGAGATCCAGGATTTCCAGTGCTAAGGCAGCTGTCACCGCCTAG 747 0.4699 MKFNVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRISSAKAAVTA* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1181 248 ProSitePatterns Ribosomal protein S6e signature. 52 63 IPR018282 GO:0003735|GO:0005840|GO:0006412
Mtr7g1181 248 PANTHER 40S RIBOSOMAL PROTEIN S6 1 244 IPR001377 GO:0003735|GO:0005840|GO:0006412
Mtr7g1181 248 Pfam Ribosomal protein S6e 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Mtr7g1181 248 PANTHER 40S RIBOSOMAL PROTEIN S6 1 244 - -
Mtr7g1181 248 PIRSF RPS6e 1 248 IPR014401 GO:0003735|GO:0005840|GO:0006412
Mtr7g1181 248 Gene3D - 133 234 - -
Mtr7g1181 248 Coils Coil 189 216 - -
Mtr7g1181 248 MobiDBLite consensus disorder prediction 219 237 - -
Mtr7g1181 248 MobiDBLite consensus disorder prediction 219 248 - -
Mtr7g1181 248 SMART Ribosomal_S6e_2 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1181 Mtr-Chr7 25148297 25151288 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1181 1 248 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 73.387 5.61e-122 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1181 K02991 - sind:105176438 431.409