Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1180 ATGAATAAGGCAAAGCAAATGATATGTCCTCCTGATAGGAAACAATCAAAACTTGGAGCCTTGCTTTCATCTTTGTCAGAGGTTGTGGCCGAAGAACGTAAAAAGCTCCTTGCTCCTGAAATGGAACAAGCGGAGGAATCAAAGAGGTTAAGAGTGCAACAAATTACTGAAGGGGCAGAAGAGATGCGGCTTACAGCTGCGCTTGAGCAGAGGAGGAATCAAAGGATCTGTAGGGAAATAACGGAAAGAGACTACAAACAAACTCAGGTTTCACTTCAGGAAGCAAAGAAGCCTTTTAAGAGACAAATGGAGAAGATACTGAAAAAATTAATTAAAACCATTGATTTTTTGGAAAGAGCAAAGAGAGGAAAGTCTGCTCCGCTTATCGAAGCAGCATATCAACAATGCCTAATGGAAGAGAGGATTCTTCACGACCGTGAGCAACAAATTTGTTTATATGTGTACTTATGTCGAATTTCGCTATTCTTTTTTTTCTATTGGAAATAG 507 0.3964 MNKAKQMICPPDRKQSKLGALLSSLSEVVAEERKKLLAPEMEQAEESKRLRVQQITEGAEEMRLTAALEQRRNQRICREITERDYKQTQVSLQEAKKPFKRQMEKILKKLIKTIDFLERAKRGKSAPLIEAAYQQCLMEERILHDREQQICLYVYLCRISLFFFFYWK* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1180 168 Coils Coil 100 120 - -
Mtr7g1180 168 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 101 151 IPR027512 GO:0005852
Mtr7g1180 168 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 101 IPR027512 GO:0005852
Mtr7g1180 168 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A 1 101 - -
Mtr7g1180 168 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A 101 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1180 Mtr-Chr7 25146254 25148078 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1180 1 149 Eukaryotic Initiation Factors Gene Family AT4G11420 39.487 6.43e-26 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1180 K03254 - mtr:MTR_7g053110 280.411