Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1173 ATGAATCAGGACAAAGCAGAAAAATTTACAAATATGATATTAGACCGAACAATTTTTCCACGTTCATCTATTAATACAACAGCCTCGGATCCTGAAGGCAAATTTTTAGTCTTAAATGTTTGTATTGACATGCCACCCAAGGTTACATCTGATGGCAATTGGGCTAATCATGATCAAGCTGCAATGCCTATGCAATCCACTTTGCCATTGTTAGAGCTTCAAATTCTCACAATCTTTGCCATTACTCAATGCTTTCATTTGGTACTTAAGCGTCTTGGGGTCCCTTATTTCGTTTCACAAATCATGGCTGGTTTAGTTCTAGGACCATCTTTGAAGTTTTCAAAAACATGGACTGGATTCAAAAATATCTTGTTTCCATACGGTACTGAAGATGTAATAAGTGTAATATCCCTAATTGGATATGCATTTTTCCTGTTTCTAACTACTGTGAAAATGGACTTCACCATGATAACAAGAACAGGTAGAAAAGCATGGACAATAGCTTTTTGTTCCTTTTTGATTCCAATGTTTTTTGGTCTCCTAGTGTGTTACAGATTCCAAGAATTTTGGAAACTCGAGATGGGAAATTTTGAAGCAAAAAACCTTCCTGTTATAGTTATAGGGCAAAGTGGTTGTTACTTTGCTGTCATAGCTTCTTTGCTTTCTGACCTTGAGATTCTTAACTCAGAACTCGGACGTTTAGCACTCTCAACAGCTATGGTTATGGATTCTTTCAACTCAATTGTTACAGGAATTGGCACAGCTTTTATTAGCAGCATCAAAACAGATTCACATGATAATGGGGATGGAAAAGGAACTCTTAAAGCCTTTTTAAATGTTTTCTATTACTTATGTTTTATGGTAGTGACTCCTCTTGTGTTGCGTCCTATATTGAAGTGGTTTGTTAAAAAGACACCAGAAGGTAGACCGATGAAGAAAGTATACATGTATATTGTGTTCATTATTGCTCTTGCAGTTGGAATGTTGGGATTATTGACAAAGCAAAGTGTTTTAGGTGGAATTTGCATTGTTGGTCTTATTGTACCTGAAGGTCCTCCATTAGGAACTGAAATGATCAAGCAATTGGAATTGTTTTGTAGTTGGTTCCTTTTTCCTATTTTTGTCACAAGTTGTGCTATGAAGATTGATCTTAGTGTATATGTTAAAAGCGACTATATTTATGTTTGGCTTGGCATTATTGTTGCTGTTCATTTGTTCAAGATGCTGGTGACCATTGGAATTTGTTGGTATTGTAACATGCCTATGGCTGATGGTTTGTGTCTTGCTCTGATGTTGAGTTGTAAAGGTGTTGTGGATTTTTGCAACAATGTGTTTCTTCATGATTCCATGCTTTTGAGCAGTGAAGCACTATTCGTTTTGAGTATAAATGTGTTGGTGATTGGAACCTTGGCACGCATTGGTGTGAAGTACTTGTATGACCCTTCAAGGAAATATGCAGGTTATCAAAAGCGTAACATCTTGAGCTTGAAACCAAACTCAGAACTTAAGATAGTTTCATGCATCCTCAAACCAAGTCACATAATTCCCATAAAGAATGTTCTTGACATTTGCAGTCCAACATCAAGCAATCCATTGGTAATTCATATCTTACATCTCTTGGAGCTTGTTGGAAGATCTTCTCCCGTTTTCATATCGCACCGGCTTCAAGAAAGAGTTGGTTCAAGTTCCCACACTTTCTCTGAAGCTGTCATCGTTACTTTTGATCTTTTCGAACATGACAATGCTGGTACTGCATCAGTGAGTACCTACACAGCTATATCGCCAGTGCGTTTCATGCACGATGATATTTGTTATCTTGCATTGGACAAACTTGCATCCATCATCATTCTTCCTTTTCATCTGAGATGGTCAGAGGATGGTTCTGTTGAATCAGCGGATGAGACCACAAGGTCTTTGAACACCAAGGTTCTTGAAAGAGCACCTTGTTCGGTAGCGATCCTTGTGAATAGAGGACACTCTTCTCCATTCAACCACAATGAGAATTCAAAGCAAATTGCCATGATTTTCTTAGGAGGTTCAGATGATAGAGAAGCATTGTGTTTGGCTAAAAGGACAATCAAAGAAGATACTTATCACTTGGTTGTGTATCACTTGGTTTCAACAATCAAGAATGATGAATTCACTAGTTGGGATGTTATGCTTGATGATGAGTTACTAAAGGGTGTTAAGGGAGTTTATGGTAGTGTAGATAACGTGACATATGAAAAAGTAGAAGTCGAAAACACTTCTGATACCACGGAATTCATCTCAGATATAGCGATTCAACATGATTTCATTATAGTTGGGAGGCGAAATGGCATCAAATCGCCTCAGACACAAGCACTTGCATCGTGGACTGAGTATCCAGAGTTAGGTGTGTTGGGAGATTTGCTTGCTTCACCCGATACTAATACCAAAGCTTCAATTTTAGTTGTGCAGCAACAAGTAATGCCTAAGGCGTCATAA 2466 0.3796 MNQDKAEKFTNMILDRTIFPRSSINTTASDPEGKFLVLNVCIDMPPKVTSDGNWANHDQAAMPMQSTLPLLELQILTIFAITQCFHLVLKRLGVPYFVSQIMAGLVLGPSLKFSKTWTGFKNILFPYGTEDVISVISLIGYAFFLFLTTVKMDFTMITRTGRKAWTIAFCSFLIPMFFGLLVCYRFQEFWKLEMGNFEAKNLPVIVIGQSGCYFAVIASLLSDLEILNSELGRLALSTAMVMDSFNSIVTGIGTAFISSIKTDSHDNGDGKGTLKAFLNVFYYLCFMVVTPLVLRPILKWFVKKTPEGRPMKKVYMYIVFIIALAVGMLGLLTKQSVLGGICIVGLIVPEGPPLGTEMIKQLELFCSWFLFPIFVTSCAMKIDLSVYVKSDYIYVWLGIIVAVHLFKMLVTIGICWYCNMPMADGLCLALMLSCKGVVDFCNNVFLHDSMLLSSEALFVLSINVLVIGTLARIGVKYLYDPSRKYAGYQKRNILSLKPNSELKIVSCILKPSHIIPIKNVLDICSPTSSNPLVIHILHLLELVGRSSPVFISHRLQERVGSSSHTFSEAVIVTFDLFEHDNAGTASVSTYTAISPVRFMHDDICYLALDKLASIIILPFHLRWSEDGSVESADETTRSLNTKVLERAPCSVAILVNRGHSSPFNHNENSKQIAMIFLGGSDDREALCLAKRTIKEDTYHLVVYHLVSTIKNDEFTSWDVMLDDELLKGVKGVYGSVDNVTYEKVEVENTSDTTEFISDIAIQHDFIIVGRRNGIKSPQTQALASWTEYPELGVLGDLLASPDTNTKASILVVQQQVMPKAS* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1173 821 Pfam Sodium/hydrogen exchanger family 80 467 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Mtr7g1173 821 PANTHER CATION/H+ EXCHANGER 2 22 819 - -
Mtr7g1173 821 Gene3D - 71 486 IPR038770 -
Mtr7g1173 821 PANTHER CATION/H + ANTIPORTER 22 819 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1173 Mtr-Chr7 25076429 25079576 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1173 40 812 Antiporter Super Family AT3G44900 37.019 3.83e-153 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1173 - - mtr:MTR_7g052895 1144.8