Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1172 ATGAATCAGGACAAAGCAGAAAAATTTACAAATATGATATTAGACCGAACAATTTTTCCACGTTCATCTATTAATACAACAGCCTCGGATCCTGAAGGCAAATTTTTAGTCTTAAATGTTTGTATTGACATGCCACCCAAGGTTACATCTGATGGAAATTGGGCTAATCATGATCAAGCTGCAATGCCTATGCAATCCACTTTGCCATTGTTAGAGCTTCAAATTCTCACAATCTTTGCCATTACACAATGCTTTCATTTGGTACTTAAGCGTCTTGGGGTCCCTTATTTCGTTTCACAAATCATGGCTGGTTTAGTTCTAGGACCATCTTTGAAGTTTTCAAAAACATGGATTGGATTCAAAAATATCTTGTTTCCATACGGTACTGAAGATGTAATAAGTGTAATATCCCTACTTGGATATGCATTTTTCCTGTTTCTAACTACTGTGAAAATGGACTTCACCATGATAACAAGAACAGGTAGAAAAGCATGGACAATAGCTTTTTGTTCCTTTTTGATTCCAATGTTTTTTGGTCTCCTAGTGTGTTACAGATTCCAAGAATTTTGGAAACTCGAGATGGGAAATTTTGAAGCAAAAAACCTTCCTGTTATAGTTATAGGGCAAAGTGGTTGTTACTTTGCTGTCATAGCTTCTTTGCTTTCTGACCTTGAGATTCTTAACTCAGAACTCGGACGTTTAGCACTCTCAACAACTATGGTTATGGATTCTTTCAACTCAATTGTTACAGGAATTGGCACAGCTTTTATTAGCAGCATCAAAACAGATTCACGTGATAATGGGGATGGAAAAGGAACTCTTAAAGCCTTTTTAAATGTTTTCTATTACTTATGTTTTATGGTAGTGACTCCTCTTGTGTTGCGTCCTATATTGAAGTGGTTTGTTAAAAAGACACCAGAAGGTAGACCGATGAAGAAAGTATACATGTATATTGTGTTCATTATTGCTCTTGCAGTTGGAATGTTGGGATTATTGACAAAGCAAAGTGTTTTAGGTGGAATTTGCATTGTTGGTCTTATTGTACCTGAAGGTCCTCCATTAGGAACTGAAATGATTAAGCAATTGGAATTGTTTTGTAGTTGGTTCCTTTTTCCTATTTTTGTCACAAGTTGTGCTATGAAGGTTGATCTTAGTGTATATGTTAAAAGCGACTATATTTATGTTTGGCTTGGCATTATTGTTGCTGTTCATTTGTTCAAGATGCTGGTGACCATTGGAATTTGTTGGTATTGTAACATGCCTATGGCTGATGGTTTGTGTCTTGCTCTGATGTTGAGTTGTAAAGGTGTTGTGGATTTTTGCAACAATGTGTTTCTTCATGATTCCATGCTTTTGAGCAGTGAAGCACTATCCGTTTTGAGTATAAATGTGTTGGTGATTGGAACCTTGGCACGCATTAGTGTGAAGTACTTGTATGACCCTTCAAGGAAATATGCAGGTTATCAAAAGCGTAACATCTTGAGCTTGAAACCAAACTCAGAACTTAAGATAGTTTCATGCATCCTCAAACCAAGTCACATAATTCCCATAAAGAATGTTCTTGACATTTGCAGTCCAACATCAAGCAATCCATTGGTAATTCATATCTTACATCTCTTGGAGCTTGTTGGAAGGTCTTCTCCCGTTTTCATATCGCACCGGCTTCAAGAAAGAGTTGGTTCAAGTTACCACACTTTCTCTGAAGCTGTCATCGTTACCTTTGATCTTTTCGAACATGACAATGCTGGACACCAAGGAGGTTCAGATGATAGAGAAGCATTGTGTTTGGCTAAAAGGACAATCAAAGAAGATACTTATCACTTGGTTGTGTATCACTTGGTTTCAACAATCAAGAATGATGAATTCACTAGTTGGGATGTTATGCTTGATGATGAGTTACTAAAGGGTGTTAAGGGAGTTTATGGTAGTGTAGATAACGTGACATATGAAAAAGTAGAAGTCGAAAACACTTCTGATACCACGGAATTCATCTCAGATATAGCGATTCAACATGATTTCATTATAGTTGGGAGGCGAAATGGCATCAAATCGCCTCAGACACAAGCACTTGCATCGTGGACTGAGTATCCAGAGTTAGGTGTGTTGGGAGATTTGCTTGCTTCACCAGATACTAATACCAAAGCTTCAATTTTAGTTGTGCAGCAACAAGTAATGCCTAAGGCGTCATAA 2190 0.374 MNQDKAEKFTNMILDRTIFPRSSINTTASDPEGKFLVLNVCIDMPPKVTSDGNWANHDQAAMPMQSTLPLLELQILTIFAITQCFHLVLKRLGVPYFVSQIMAGLVLGPSLKFSKTWIGFKNILFPYGTEDVISVISLLGYAFFLFLTTVKMDFTMITRTGRKAWTIAFCSFLIPMFFGLLVCYRFQEFWKLEMGNFEAKNLPVIVIGQSGCYFAVIASLLSDLEILNSELGRLALSTTMVMDSFNSIVTGIGTAFISSIKTDSRDNGDGKGTLKAFLNVFYYLCFMVVTPLVLRPILKWFVKKTPEGRPMKKVYMYIVFIIALAVGMLGLLTKQSVLGGICIVGLIVPEGPPLGTEMIKQLELFCSWFLFPIFVTSCAMKVDLSVYVKSDYIYVWLGIIVAVHLFKMLVTIGICWYCNMPMADGLCLALMLSCKGVVDFCNNVFLHDSMLLSSEALSVLSINVLVIGTLARISVKYLYDPSRKYAGYQKRNILSLKPNSELKIVSCILKPSHIIPIKNVLDICSPTSSNPLVIHILHLLELVGRSSPVFISHRLQERVGSSYHTFSEAVIVTFDLFEHDNAGHQGGSDDREALCLAKRTIKEDTYHLVVYHLVSTIKNDEFTSWDVMLDDELLKGVKGVYGSVDNVTYEKVEVENTSDTTEFISDIAIQHDFIIVGRRNGIKSPQTQALASWTEYPELGVLGDLLASPDTNTKASILVVQQQVMPKAS* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1172 729 Pfam Sodium/hydrogen exchanger family 80 471 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Mtr7g1172 729 PANTHER CATION/H + ANTIPORTER 586 727 - -
Mtr7g1172 729 PANTHER CATION/H + ANTIPORTER 22 584 - -
Mtr7g1172 729 PANTHER CATION/H+ EXCHANGER 2 22 584 - -
Mtr7g1172 729 PANTHER CATION/H+ EXCHANGER 2 586 727 - -
Mtr7g1172 729 Gene3D - 71 486 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1172 Mtr-Chr7 25059079 25062058 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1172 586 720 Antiporter Super Family AT3G44900 44.526 4.11e-26 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1172 - - mtr:MTR_7g052895 1447.95