Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1143 ATGTTCAAAATGGTTTACTTGTGCTTGGTCTTGCTTCACATTTTCTTGAGCTTTGTTCCAATTCAATCAGCACCAAGAAAGTCTTTAATAACCAAACTTCCTGGCTTCAGTGGTATTATACCTTCCAAGCACTATGCTGGGTACGTGACATTGGATAAAATTCATGGCAAAAACTTGTACTACTATTTTGTTGAATCAGAAGGAAATCCTTCAAAGGACCCTCTTGTTCTATGGCTTAATGGTGGACCTGCATGTTCTAGCTTTGATGGCTTCATATATGAACATGGTCCTTTTAATTTTATAAAACCAAAAACTAAGGGAACCTTGCCTACATTGCAACTCAATCCATACAGCTGGTCAAAGGTTTCCAACATTATATATTTGGACTCCCCTGTTGGAACTGGGTTTTCTTACTCAAGGAATGAATCTGATTACTATACTGGTGATACAAAGACTGCTTTTGATACTCATACTTTTCTCCTCCAGTGGTTTAAATTATACCCTGAGTTTCTTGCCAACCCATTATTCATTGCTGGAGAATCTTATGCTGGAATTTATGTACCTACTCTTGCTGATAAAATAGTAGAAGGAATTGAAGCTGGTATCAAGCCCAAACTGAATTTCAAGGGTTACATGGTTGGAAATCCAGTAACTGATCATAAATTTGATGGCAATGCTATTATTCCTTTTGTACACGGGATGGGTCTTATCTCCGATGAAATATTTGAGAATGTAACAAAAGAATGTAGGGGAAAATTCTATGAACTAGGCAGCAATGGTTGCACTCAAGTGTTGATGAATATTGGAGAGATACTAGACAAATTAAACATGTATGACATTCTAGAACCATGTTATCATGGAGAGAAAGAGGAGAATAATGAATCATATTCTAAGTTGCCATTAAGCTTTAGACAATTGGGCAAGACTGATAGACCTATGCCTGTGAGGAAAAGAATGTTTGGACGTGCTTGGCCCTATAGAGCTATTGTGAAAGATGGATATGTGCCATCTTGGCCAGAACTTGAAAGCAATAGTGGTGGTGCTCCTCCTTGCGTTGACGACGAGGTTTCTGTGATATGGCTGAACAATCGTAAGGTCCGAAGAGCTATTCACACTGTGAAGGAGAGTGTGGTCAAGGAGTGGGTTTTATGCACGGGGAAAGTTAGATATGTTCATGACAGTGGGAGCATGATTCCATACCACAAAAAACTAACTTCCAAAGGATATCGAGCTTTAGTTTACAGTGGTGATCATGATATGTGTGTCCCATTTACTGGAACAGAAGCATGGACAAGATCAGTTGGATATAAAATTATTGATCCATGGAGGCCCTGGTTAATCAACAATCAAATTGCTGGGTTCACACAAGGATATGCCAATAATTTCACATTTCTTACTGTAAAGGGATCTGGACATACTGTTCCAGAATATAAACCACATGAAGCATTTCATTTTTACCAACATTTTATAAATGGGTTGCCTATATAG 1488 0.3831 MFKMVYLCLVLLHIFLSFVPIQSAPRKSLITKLPGFSGIIPSKHYAGYVTLDKIHGKNLYYYFVESEGNPSKDPLVLWLNGGPACSSFDGFIYEHGPFNFIKPKTKGTLPTLQLNPYSWSKVSNIIYLDSPVGTGFSYSRNESDYYTGDTKTAFDTHTFLLQWFKLYPEFLANPLFIAGESYAGIYVPTLADKIVEGIEAGIKPKLNFKGYMVGNPVTDHKFDGNAIIPFVHGMGLISDEIFENVTKECRGKFYELGSNGCTQVLMNIGEILDKLNMYDILEPCYHGEKEENNESYSKLPLSFRQLGKTDRPMPVRKRMFGRAWPYRAIVKDGYVPSWPELESNSGGAPPCVDDEVSVIWLNNRKVRRAIHTVKESVVKEWVLCTGKVRYVHDSGSMIPYHKKLTSKGYRALVYSGDHDMCVPFTGTEAWTRSVGYKIIDPWRPWLINNQIAGFTQGYANNFTFLTVKGSGHTVPEYKPHEAFHFYQHFINGLPI* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1143 495 ProSitePatterns Serine carboxypeptidases, serine active site. 177 184 IPR018202 GO:0004185
Mtr7g1143 495 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 16 492 IPR001563 GO:0004185|GO:0006508
Mtr7g1143 495 Pfam Serine carboxypeptidase 34 492 IPR001563 GO:0004185|GO:0006508
Mtr7g1143 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185|GO:0006508
Mtr7g1143 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185|GO:0006508
Mtr7g1143 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185|GO:0006508
Mtr7g1143 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 462 475 IPR001563 GO:0004185|GO:0006508
Mtr7g1143 495 Gene3D - 348 494 - -
Mtr7g1143 495 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 20 16 492 - -
Mtr7g1143 495 ProSitePatterns Serine carboxypeptidases, histidine active site. 462 479 IPR033124 GO:0004185
Mtr7g1143 495 Gene3D alpha/beta hydrolase 22 306 IPR029058 -
Mtr7g1143 495 SUPERFAMILY alpha/beta-Hydrolases 30 494 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1143 Mtr-Chr7 24480544 24486513 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1143 356 495 Calmodulin-binding Proteins AT2G22960 52.143 2.98e-45 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1143 K16296 - gmx:100792057 759.985