Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1142 ATGGCAAATTTCTACTTGGTGTTGCTTCACATTTCTCTAACCTTTGTGTTGACACATTCAGCACCTAAAGGATCTCTTATAACCCACCTTCCAGGCTTCAATGGATCTCTACCTTCCAAGCACTATGCCGGGTATGTGACAGTTGATAAAAATCATGGAAGAAACTTGTATTACTACTTTGTGGAATCAGAAGGTAATTCATCCAAGGACCCTTTGGTTCTATGGCTTAATGGTGGTCCAGGATGTTCTAGTTTTGATGGCTTCGTATATGAGCATGGTCCTTTTAATTTTGAAAAACCTAAGACCAAGGGAACCTTGCCTAAGTTGAAACCAAATCCATACAGCTGGTCAAAGGTTTCCAACATTATATATTTGGACTCTCCTGCTGGAGTAGGGTTTTCATACTCAAAAAATTTATCTGATTATAAGTCTGCTGGAGATGTAAAGACCGCATCTGATACATATACTTTTCTCCTAAAGTGGTTTGAATTATATCCTGAGTTCCTTGCCAACCCATTATTCATTTCTGGAGAGTCTTATGCTGGAGTTTATGTGCCTACTCTTGCTGATTTAATAGTGAAAGGAATTGAAGCTGGTACCAAGCCTAAATTCAATTTCAAGGGTTATTTGATTGGAAATCCTGTTACTGATGATGTATTTGATGGAAATGCTATTGTTTCATTTGCACATGGAATGGGTCTTATCCCAGATAAACTTTTTAAGGAGTCAACAAAAGAATGCAATGGGACTTTCTATGTAGTATACACCGATAAGTGCTACAATTTGTTGGAAAAAATTCATAAGGACATTCAGGGATTAAATGTATATGACATTCTGGAACCATGTTATCATGGTGGAGAGAATAAAACATCAAATTCTAAATTGCCATTAAGCTTTAGGCAATTGGGTAAGACTGATAAATCTCTTCCTATAAGGAAAAGAATGTTTGGACGTGCTTGGCCCTATAGAGCTATTGTAAAAGATGGATTTGTGCCATCTTGGCCAGAACTTGTAAGCAATAGTGACACTGCTCCTCCTTGCATTGACGATGAGGTTGCTATGGTATGGCTAAACAATCCTCAAGTCAGAAGAGCTATTCACACTGTGGAGAAAAGTGTGGTCAAGGGATGGACCTTATGTACAGACCAAATTAAATACAAACATGATACAGGAAGTATGATCAAATACCACAAGAAACTTACTTCCAAGGGTTATAGAGCATTAATATACAGTGGTGATCATGACATGTGTGTCCCATATACTGGAACTGAAGCTTGGACAAAATCAATTGGATATAAGATTGTTGATGAATGGAGGCCTTGGTTAACCAATGATCAAATTGCTGGGTATACACAAAGATACGCCAACAATCTCACATTTCTAACCATAAAGGGATCTGGGCACACTGTTCCGGAATATAAGCCACAAGAGTCATTGTATTTTTACAAACAATTTCTGAATGGGTTGCATGTGTAA 1476 0.378 MANFYLVLLHISLTFVLTHSAPKGSLITHLPGFNGSLPSKHYAGYVTVDKNHGRNLYYYFVESEGNSSKDPLVLWLNGGPGCSSFDGFVYEHGPFNFEKPKTKGTLPKLKPNPYSWSKVSNIIYLDSPAGVGFSYSKNLSDYKSAGDVKTASDTYTFLLKWFELYPEFLANPLFISGESYAGVYVPTLADLIVKGIEAGTKPKFNFKGYLIGNPVTDDVFDGNAIVSFAHGMGLIPDKLFKESTKECNGTFYVVYTDKCYNLLEKIHKDIQGLNVYDILEPCYHGGENKTSNSKLPLSFRQLGKTDKSLPIRKRMFGRAWPYRAIVKDGFVPSWPELVSNSDTAPPCIDDEVAMVWLNNPQVRRAIHTVEKSVVKGWTLCTDQIKYKHDTGSMIKYHKKLTSKGYRALIYSGDHDMCVPYTGTEAWTKSIGYKIVDEWRPWLTNDQIAGYTQRYANNLTFLTIKGSGHTVPEYKPQESLYFYKQFLNGLHV* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1142 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Mtr7g1142 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Mtr7g1142 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Mtr7g1142 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 458 471 IPR001563 GO:0004185|GO:0006508
Mtr7g1142 491 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 20 13 488 - -
Mtr7g1142 491 ProSitePatterns Serine carboxypeptidases, histidine active site. 458 475 IPR033124 GO:0004185
Mtr7g1142 491 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 13 488 IPR001563 GO:0004185|GO:0006508
Mtr7g1142 491 Pfam Serine carboxypeptidase 31 488 IPR001563 GO:0004185|GO:0006508
Mtr7g1142 491 Gene3D alpha/beta hydrolase 20 317 IPR029058 -
Mtr7g1142 491 SUPERFAMILY alpha/beta-Hydrolases 27 489 IPR029058 -
Mtr7g1142 491 ProSitePatterns Serine carboxypeptidases, serine active site. 175 182 IPR018202 GO:0004185
Mtr7g1142 491 Gene3D - 344 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1142 Mtr-Chr7 24471497 24476503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1142 352 488 Calmodulin-binding Proteins AT2G22960 48.905 7.88e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1142 K16296 - gmx:100792057 728.013