Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1136 ATGAAGAAACAGATTCAGCGATTTGTGCAGGCATGTGATATTTGTCAAAGGCAAAAATATGTAGCAACAACTCCCGGGAGGCTTCTCCAATCACTGCCGGTGCCATCTCAAATTTGGGAGGATGTGTCGAAGGATTTCATCACCGGTTTACCGAAATCTAAGGGCTATGAGGCAGTGATGGTGGTGGTGGATAGACTGTCAAAGTATGCGCACTTCATACCTCTGAAGCATCCTTATTCAGCAAAAACACTTGCTGACGTGTTTGTTAAGGAAGTCATAAGGCTGCACGGTGTTCCGATATCGATTGTAAGCGATAGAGATCCGATATTTGTGAGCAAATGCACGATTTTTATGGATTCTGTGGTAGTGGATTCAGACAAGGGAAATGAGGCAGATCATAGCTTTCTAGAAGAGAGCACACATATATTGGATGGAGTTGAACTTCAAGAGCCATATGTGGGCATGGAGTTTGATTCTGAAGAAGCTGCCAGGAAGTTTTATGCTGAATATGCTAGACGCGTAGGATTTGTTGTGCGCGTTATGCAACGTCGACGTTCTGGAATTGATGGCAGGACTCTTGCTCGTCGACTTGGATGTAACAAACAAGGATTCTCACCAAATAGCAAGGGAACATTGGGAAAAGAAAAAAGACCACGGCCTAGTGCACGAGAAGGTTGCATGGCAACAATTTTGGTTAAGATGGAAAAATCTGGAAAATGGGTTGTCACAAGATTTATAAAAGATCACAACCATCCTCTAACTGCCACAGCTAATGGTTTCAGGACAGAGGACGATAAAGATAAGAAAATCGCTGAACTTACTATGGAGTTGGAGCGACAAGATGAACTATGTGCTGCATATAGAGAAAAACTACTCAGCTTCATAAACAATATTGAGGAGCAAACGGAGGAAATGTCCACAAGAGTTCAACTCATTATTGAAAATATAAGGAGAGCTGAGTCTGAAATGCAAAAAAGCTCACAGAAAGTGTATAATTGA 999 0.4204 MKKQIQRFVQACDICQRQKYVATTPGRLLQSLPVPSQIWEDVSKDFITGLPKSKGYEAVMVVVDRLSKYAHFIPLKHPYSAKTLADVFVKEVIRLHGVPISIVSDRDPIFVSKCTIFMDSVVVDSDKGNEADHSFLEESTHILDGVELQEPYVGMEFDSEEAARKFYAEYARRVGFVVRVMQRRRSGIDGRTLARRLGCNKQGFSPNSKGTLGKEKRPRPSAREGCMATILVKMEKSGKWVVTRFIKDHNHPLTATANGFRTEDDKDKKIAELTMELERQDELCAAYREKLLSFINNIEEQTEEMSTRVQLIIENIRRAESEMQKSSQKVYN* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1136 332 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 115 328 - -
Mtr7g1136 332 SUPERFAMILY Ribonuclease H-like 32 114 IPR012337 -
Mtr7g1136 332 MobiDBLite consensus disorder prediction 199 220 - -
Mtr7g1136 332 Pfam FAR1 DNA-binding domain 165 254 IPR004330 -
Mtr7g1136 332 Coils Coil 309 329 - -
Mtr7g1136 332 Coils Coil 270 304 - -
Mtr7g1136 332 Gene3D - 29 135 IPR036397 GO:0003676
Mtr7g1136 332 ProSiteProfiles Integrase catalytic domain profile. 29 113 IPR001584 GO:0015074
Mtr7g1136 332 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 115 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1136 Mtr-Chr7 24361991 24375585 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr7g1136 FAR1 3.1e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1136 - - vun:114183030 357.451