Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1135 ATGGGTAAAAATATTGTTATGAATGAAAATAAGAACATGAATGGGTCTATTAGGTCCATTTTCATGCATGCTGATGGGGAAGATTGGTTCCTTATGATTTTAGGTACCATTGGAGCAATTGGTGAAGGTTTCAACGCTCCTTTGATTTTGTATATTTGTAGCCACATGATTAACAATATTGGAAGTTCATCTACCATGGATGTAGACACTTTCATCCATAACATCAACAAGAATGCTTTGGTTTGGTTATATTTGGCTTGTGCAACTTTTCTTGTTTGCTTTCTTGAGGGATATTGTTGGACAAGGACAAGTGGAAGACAAGCTGCAAGAATGAGATACAAGTACTTAAAAGCAGTACTTAGGCAAGAAGTTGCTTATTTTGATTTGCAGGTTACAAGCACCTCAGAAATCATCACTAGTGTCTCTAATGACACTATTGTAATTCAAGATGTTCTTAGTGAGAAGGTTCCAAATTTCTTGATGAACATTTCATTGTTTATTGGGAGCTACATAGTGGCATTTACAATGTTATGGAGAATGGCCATTGTAGCATTTCCATCTGTTATTCTTCTGGTAATCCCTGGAATAATCTATGGCAAGGTTTTGATGGGTTTATCCTGCAAGATTAGAGAAGAGTATAATCAAGCTGGTACAATTGCAGAACAAACAATATCTACCATTAGAACTGTCTATTCATTTGTGGGAGAAAACAAATCCATGTTTGCTTTCTCTAATGCTTTGCAAGGGATTGTTAATTTGGGTTTAAAACAAGGATTAGCTAAAGGTTTAGCAATTGGAAGCAATGGTGTTGTCTTTGCAATTTGGTCCTTCATGTGCTATTATGGTAGCAAATTGGTTATGTATCATGGTGCTAAAGGAGGGACAGTTTTTGCAGTTGGAGCATCCATAACTGTTGGTGGATTAGGATTAGGAGCAAGTTTATTAAACATAAAGTATTTCTCAGAAGCATGTTCAGCTGGTGAAAGAATAAAGAGAGTAATTGAAAGAGTTCCCAAGATAGATTCCAACAACACAAAAGGAGAGATATTAAACAATGTTTTTGGGGAAGTGGAATTTGACCATGTAGAATTTGCATATCCAACAAGACCAGAAACCATTATCCTTAAAAACTTGTGTCTCAAGATTCCAGCAGGGAAAACAATGGCATTGGTTGGTGAGAGTGGTTCAGGGAAATCAACTGTGATATCTTTATTGCAACGGTTTTATGATCCAATCGGTGGTGAGATACGTCTTGATGGAGTAGCTATTCGTAACTTGCAGATTAAATGGCTTAGGTCAATGATGGGGTTGGTTAGTCAAGAACCTGCTTTATTTGCAACAAGCATTAAAGAGAATATAATTTTTGGTAAAGAAGATGCTACCGAAGATGAGATTGTTGAAGCTGCGAAAATTTGTAATGCTCATGATTTCATTTCTTTGCTTCCTCAAGGTTACAATACTCAGGTAGGAGAAAGAGGGATTCAATTATCAGGTGGACAAAAACAAAGAATAGCAATTGCTCGAGCAATAATTAAGAAACCGCGAATCTTTCTTTTGGATGAAGCAACTAGTGCGTTAGACACTGAGTCAGAAAAAATGGTCCAACAAGCACTCGAAAATGCAACAAACGGATGCACTGCCATCATAATCGCCCACCGCCTCTCCACAATCCAAAATGCCGACATTGTTGCCGTTGTGGACGATGGAAGAGTCAATGAGATTGGCTCACAGGATGAACTTCTAGAAAATGAAAATGGCATCTACTCGTCCCTTGTCCGCCTTCAACAAACCAACAAATCCAAAACACAATCAGATGAAACTGTTACAGCTACTTTCACCAATGTAGACACAGATATCACGTGTCTAGTGGACCCTACTAGTTCAGCTGAAGATCACATTAGCGTCCATCAAGCTAGTACTAGTAACAACAAAAATGAAGAAGACGTGAAGCAACTAAATAATCCGGTGTCATTTTGGAGATTACTTCTACTGAACGCTCCAGAATGGAAGCAAGCGGTTTTAGGGTGTTTGAGTGCAATGGTGTTCGGTGCAGTTCAACCTGTTTACGCATTTGCAATGGGGTCGATGATATCTGTGTATTTTCAAACAGATTACGAGGAGCTAAAAAACAAGATTAAAATCTATTCTCTTTGTTTTCTGTGTCTATCGTTAATATCATTGGTGGTTAATGTTGGGCAACATTATAACTTCGCTTACATGGGAGAATATTTGACTAAACGTGTGAGAGAGAGCATGTTTTCTAAAATGCTCACGTTTGAAGTTGGGTGGTTCGATCGTGAAGAAAATTCCAGTGGTGCTATTTGTTCTCGACTTGCCAATGATGCTAATGTGGTGAGGTCATTAGTTGGTGATAGAATGGCTTTGTTGGTACAAGCTTTCTCAGCAGTAGCAACAGCATACACTATGGGTCTGATCATTTCATGGAGGCTCAACCTTGTTATGATCGCCATTCAACCGATTATAATAGCTTGCTTTTACACAAGAAGTGTATTACTCAAAAGCATGTCAAGTAAGTCTATGAAGGCCCAACAACAAAGTAGTAAGATAGCTGCTGAAGCTGTTTCAAATCATAGAACCATAACTGCTTTTTCTTCTCAAGATAGAATACTCAAAATGCTTGAAACCTCCCAACAAGACCCAATTCAAGAGAATTTTCGACAGTCGTGGTTTGCTGGTATTGGGCTTGGGTTTTCACAATTCCTCTTATCTTGTTCTTGGGCCATGAATTATTGGTACGGCGCCAAGCTTGTTGCTGATGGGAACATAACAAGGAAAGCATTGTTTGAGAGTTTTATGGTGGTCGTGAGCACGGGACGGGTTATAGGTGATGCTGGCAGCATGACTAAAGACCTTGCCAAAGGCGTTGATGTTGTGAGCTCTATTTTTGCCATTCTTGATCGGTCTACCAAAATCAAGCCAGACAACCCTAACGGATTTAAGCCCGATACATTAATGGGCCATATCGAACTCTACGACGTGCATTTTGCTTACCCCGCTAGGCCAAATGTGGCTATCTTTCAAGGTTTTTCAATCAAAATTGAAGCAGGGAAATCGACGGCATTAGTGGGGCAAAGCGGGTCTGGCAAATCAACCATCATAGGATTAATAGAGAGATTCTATGATCCAATAAAAGGAAATGTGACAATAGATGGTACAAACATAAAATCATATAACCTAAAGTCACTAAGAAAACACATAGCACTTGTGAGCCAAGAACCAACATTGATAAATGGAACCATAAGAGACAACATTGCATATGGAACAACAACATGTGACAACATCGATGAAACTGAGATCATAGAGGCATCAAGAGTAGCCAATGCTCATGATTTCATTGCAAGTTTGAAAGATGGGTATGAGACATGGTGTGGGGACAAAGGAGTGCAACTTTCAGGGGGGCAAAAACAAAGGATAGCAATAGCTAGAGCCATGTTGAAGAATCCAAAGGTGTTGCTTCTAGATGAAGCAACAAGTGCACTTGATAATAATTCAGAAAAGGTAGTGCAAGATGCATTGAATAAGGTAATGGTTGGAAGGACTAGTGTGGTTGTAGCACATAGGTTGAGTACCATACACAATTGTGATGTTATTGCTGTTTTAGAAAAAGGGAAAATGGTTGAAATTGGAACTCACAAAGCATTATTGGATAAAGGACCTTTTGGTGCTTATTACTCTTTGGTGAGTCTTCAAACTAAACATGCATAA 3726 0.3886 MGKNIVMNENKNMNGSIRSIFMHADGEDWFLMILGTIGAIGEGFNAPLILYICSHMINNIGSSSTMDVDTFIHNINKNALVWLYLACATFLVCFLEGYCWTRTSGRQAARMRYKYLKAVLRQEVAYFDLQVTSTSEIITSVSNDTIVIQDVLSEKVPNFLMNISLFIGSYIVAFTMLWRMAIVAFPSVILLVIPGIIYGKVLMGLSCKIREEYNQAGTIAEQTISTIRTVYSFVGENKSMFAFSNALQGIVNLGLKQGLAKGLAIGSNGVVFAIWSFMCYYGSKLVMYHGAKGGTVFAVGASITVGGLGLGASLLNIKYFSEACSAGERIKRVIERVPKIDSNNTKGEILNNVFGEVEFDHVEFAYPTRPETIILKNLCLKIPAGKTMALVGESGSGKSTVISLLQRFYDPIGGEIRLDGVAIRNLQIKWLRSMMGLVSQEPALFATSIKENIIFGKEDATEDEIVEAAKICNAHDFISLLPQGYNTQVGERGIQLSGGQKQRIAIARAIIKKPRIFLLDEATSALDTESEKMVQQALENATNGCTAIIIAHRLSTIQNADIVAVVDDGRVNEIGSQDELLENENGIYSSLVRLQQTNKSKTQSDETVTATFTNVDTDITCLVDPTSSAEDHISVHQASTSNNKNEEDVKQLNNPVSFWRLLLLNAPEWKQAVLGCLSAMVFGAVQPVYAFAMGSMISVYFQTDYEELKNKIKIYSLCFLCLSLISLVVNVGQHYNFAYMGEYLTKRVRESMFSKMLTFEVGWFDREENSSGAICSRLANDANVVRSLVGDRMALLVQAFSAVATAYTMGLIISWRLNLVMIAIQPIIIACFYTRSVLLKSMSSKSMKAQQQSSKIAAEAVSNHRTITAFSSQDRILKMLETSQQDPIQENFRQSWFAGIGLGFSQFLLSCSWAMNYWYGAKLVADGNITRKALFESFMVVVSTGRVIGDAGSMTKDLAKGVDVVSSIFAILDRSTKIKPDNPNGFKPDTLMGHIELYDVHFAYPARPNVAIFQGFSIKIEAGKSTALVGQSGSGKSTIIGLIERFYDPIKGNVTIDGTNIKSYNLKSLRKHIALVSQEPTLINGTIRDNIAYGTTTCDNIDETEIIEASRVANAHDFIASLKDGYETWCGDKGVQLSGGQKQRIAIARAMLKNPKVLLLDEATSALDNNSEKVVQDALNKVMVGRTSVVVAHRLSTIHNCDVIAVLEKGKMVEIGTHKALLDKGPFGAYYSLVSLQTKHA* 1242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1135 1241 ProSitePatterns ABC transporters family signature. 496 510 IPR017871 GO:0005524
Mtr7g1135 1241 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 673 960 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr7g1135 1241 Pfam ABC transporter transmembrane region 674 943 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr7g1135 1241 Pfam ABC transporter transmembrane region 32 304 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr7g1135 1241 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 357 593 IPR003439 GO:0005524
Mtr7g1135 1241 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 17 1239 - -
Mtr7g1135 1241 CDD ABC_MTABC3_MDL1_MDL2 357 595 - -
Mtr7g1135 1241 CDD ABC_6TM_Pgp_ABCB1_D1_like 32 330 - -
Mtr7g1135 1241 ProSitePatterns ABC transporters family signature. 1137 1151 IPR017871 GO:0005524
Mtr7g1135 1241 Gene3D - 347 596 IPR027417 -
Mtr7g1135 1241 Pfam ABC transporter 375 524 IPR003439 GO:0005524
Mtr7g1135 1241 Pfam ABC transporter 1014 1165 IPR003439 GO:0005524
Mtr7g1135 1241 Gene3D - 985 1241 IPR027417 -
Mtr7g1135 1241 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 33 299 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr7g1135 1241 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 349 595 IPR027417 -
Mtr7g1135 1241 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 17 1239 IPR039421 -
Mtr7g1135 1241 SUPERFAMILY ABC transporter transmembrane region 26 338 IPR036640 GO:0005524|GO:0016021
Mtr7g1135 1241 CDD ABC_6TM_Pgp_ABCB1_D2_like 662 978 - -
Mtr7g1135 1241 Gene3D ABC transporter type 1, transmembrane domain 20 961 IPR036640 GO:0005524|GO:0016021
Mtr7g1135 1241 SMART AAA_5 384 576 IPR003593 -
Mtr7g1135 1241 SMART AAA_5 1022 1217 IPR003593 -
Mtr7g1135 1241 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 995 1234 IPR003439 GO:0005524
Mtr7g1135 1241 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 985 1237 IPR027417 -
Mtr7g1135 1241 CDD ABC_MTABC3_MDL1_MDL2 995 1237 - -
Mtr7g1135 1241 SUPERFAMILY ABC transporter transmembrane region 660 974 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1135 Mtr-Chr7 24331960 24338097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1135 16 1237 Calmodulin-binding Proteins AT2G36910 43.720 0.0 1038
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1135 K05658 - gmx:100791575 1746.48