Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1131 ATGGCTAATCAACAATCTTTGCTAGACAAGCCTAGAAAATCCCTTCCAAAAACATTTTGGTTAATCCTCTCTTTAGTTGCTATCATAATCTCATCAGCCCTAATTTCTACTCATCTCAAGAAACCAATCTCATTTTTTCACCTCACCACAGTTCAGAATGTTTACTGTGAACATGCTGTTGATACAAAATCTTGCTTAGCTCATGTATCCGAAGTATCTCACGTTCCAACTTTGGTCACGACAAAAGACCAAAACTTGCATGTACTCTTGTCCTTATTAACAAAGTCCACCACACACATTCAAAATGCTATGGACACAGCCAGTGTTATCAAACGCCGAATTAACAGCCCTAGAGAAGAAATTGCTTTGAGTGACTGTGAACAACTAATGGACTTGTCCATGAACAGAATTTGGGACACGATGTTAAAGCTAACAAAAAATAATATTGACTCACAGCAAGATGCACATACATGGCTAAGCAGTGTGCTCACTAACCATGCAACTTGCTTGGATGGATTAGAAGGTTCATCTCGGGTCGTTATGGAAAATGACCTTCAGGACTTGATATCAAGAGCTAGATCTTCTCTAGCTGTGTTTCTTGTTGTTTTTCCTCAAAAGGATCGTGACCAATTCATTGATGAAACATTGATTGGAGAATTTCCATCGTGGGTTACAAGCAAAGATCGGAGGCTTTTGGAGACCGCGGTTGGGGACATAAAGGCAAATGTTGTCGTAGCTCAGGATGGGAGTGGCAAGTTCAAGACTGTGGCTGAGGCTGTGGCATCTGCACCTGACAACGGTAAGACAAAGTATGTTATCTATGTGAAAAAGGGAACATACAAAGAGAACGTAGAAATTGGTTCGAAAAAAACAAATGTGATGCTCGTTGGTGATGGAATGGATGCAACAATAATCACAGGAAACTTAAATTTTATCGATGGGACAACGACCTTCAAAAGTTCAACTGTTGCTGCGGTTGGGGATGGGTTTATAGCACAAGATATTTGGTTCCAAAATATGGCAGGCGCAGCAAAGCACCAGGCAGTGGCTCTCCGTGTCGGCTCTGACCAATCTGTCATCAACCGTTGCCGCATTGACGCCTTTCAAGACACTCTTTACGCACACTCCAACCGGCAGTTTTACCGTGACTCTGTCATTACAGGTACCATTGACTTCATCTTTGGAAATGCAGCTGTTGTGTTCCAGAAGTGCAAGTTGGTGGCCCGTAAACCCATGGCCAACCAAAACAATATGTTTACAGCCCAAGGTCGAGAAGACCCCGGTCAAAACACAGGTACTTCAATTCAACAATGTGACCTAACACCAAGTTCAGACCTTAAGCCCGTCGTAGGCTCCATCAAAACTTTCCTCGGCCGCCCATGGAAGAAATACTCCAGGACTGTTGTGATGCAATCCTTTCTGGACAGCCACATCGACCCAACAGGATGGGCTGAGTGGGATGCCGCGAGTAAGGACTTTCTGCAGACACTGTACTACGGAGAGTACTTGAACAATGGACCAGGTGCTGGTACTGCCAAGAGAGTGACTTGGCCAGGTTATCATGTCATCAATACTGCTGCAGAGGCTAGCAAGTTTACGGTAGCACAACTAATCCAAGGTAATGTTTGGTTGAAGAACACAGGGGTGGCCTTTACTGAGGGCTTGTAA 1668 0.44 MANQQSLLDKPRKSLPKTFWLILSLVAIIISSALISTHLKKPISFFHLTTVQNVYCEHAVDTKSCLAHVSEVSHVPTLVTTKDQNLHVLLSLLTKSTTHIQNAMDTASVIKRRINSPREEIALSDCEQLMDLSMNRIWDTMLKLTKNNIDSQQDAHTWLSSVLTNHATCLDGLEGSSRVVMENDLQDLISRARSSLAVFLVVFPQKDRDQFIDETLIGEFPSWVTSKDRRLLETAVGDIKANVVVAQDGSGKFKTVAEAVASAPDNGKTKYVIYVKKGTYKENVEIGSKKTNVMLVGDGMDATIITGNLNFIDGTTTFKSSTVAAVGDGFIAQDIWFQNMAGAAKHQAVALRVGSDQSVINRCRIDAFQDTLYAHSNRQFYRDSVITGTIDFIFGNAAVVFQKCKLVARKPMANQNNMFTAQGREDPGQNTGTSIQQCDLTPSSDLKPVVGSIKTFLGRPWKKYSRTVVMQSFLDSHIDPTGWAEWDAASKDFLQTLYYGEYLNNGPGAGTAKRVTWPGYHVINTAAEASKFTVAQLIQGNVWLKNTGVAFTEGL* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1131 555 TIGRFAM PME_inhib: pectinesterase inhibitor domain 23 181 IPR006501 GO:0004857
Mtr7g1131 555 SMART PMEI_2 46 198 IPR006501 GO:0004857
Mtr7g1131 555 PANTHER PECTINESTERASE 25 553 - -
Mtr7g1131 555 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 55 180 IPR035513 -
Mtr7g1131 555 Gene3D Invertase/pectin methylesterase inhibitor family protein 52 201 IPR035513 -
Mtr7g1131 555 SUPERFAMILY Pectin lyase-like 240 554 IPR011050 -
Mtr7g1131 555 ProSitePatterns Pectinesterase signature 2. 386 395 IPR033131 -
Mtr7g1131 555 PANTHER PECTINESTERASE 25 553 - -
Mtr7g1131 555 Pfam Plant invertase/pectin methylesterase inhibitor 56 190 IPR006501 GO:0004857
Mtr7g1131 555 ProSitePatterns Pectinesterase signature 1. 267 286 IPR018040 -
Mtr7g1131 555 CDD PMEI-like_4 58 202 - -
Mtr7g1131 555 Gene3D - 236 555 IPR012334 -
Mtr7g1131 555 Pfam Pectinesterase 242 541 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1131 Mtr-Chr7 24282579 24284810 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1131 1 555 Carbohydrate Esterase AT1G11580 55.986 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1131 K01051 - gmx:100815836 862.833