Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1130 ATGGCTACCCAAGAAACTTTGCTACACAAGCCTAGAAAATCCATTCCCAAAACATTTTGGTTAGTTCTCTCTTTAGCTGCTATCATAAGCTCATCAGCCCTTATTATTTCTCATCTGAACAAACCCATCTCCATTTTCCACTTCTCCTCAGCTCCTAATGTGTGTGAACATGCAGTTGATACAAACTCATGCTTAACTCATGTAGCTGAGGTAGTTCAAGGTTCAACCTTGGACAACACAAAAGACCACAAATTGAGTACACTCATATCGTTGTTAACCAAATCCACCACACACATTCGAAAGGCCATGGACACGGCTAATGTTATCAAACGCCGAATTAACAGCCCTAGAGAAGAAAATGCTTTGAATGTCTGTGAAAAACTAATGAACTTGTCCATGGAAAGAGTTTGGGACTCAGTGTTAACTCTCACAAAAGATAATATGGACTCACAGCAAGATGCACACACTTGGCTAAGTAGTGTGCTCACAAACCATGCAACTTGTTTGGATGGATTAGAAGGTACGTCTCGGGCTGTTATGGAAAATGACATTCAGGACTTAATAGCAAGAGCTAGATCATCTCTAGCCGTGCTTGTTGCCGTTTTACCTCCAAAGGATCACGACGAATTCATTGATGAATCATTGAATGGTGACTTTCCCTCTTGGGTAACAAGTAAAGATCGAAGGCTTTTGGAGTCTTCAGTTGGAGACGTAAAGGCCAATGTTGTGGTGGCTAAAGACGGGAGTGGCAAGTTCAAGACTGTTGCTGAGGCTGTTGCATCTGCACCTAACAAAGGTACGGCAAGGTATGTTATCTACGTGAAAAAGGGAATCTACAAAGAGAATGTAGAAATCGCTAGTTCAAAGACGAACGTGATGCTCTTGGGTGACGGTATGGATGCAACGATAATCACAGGCAGCTTAAATTACGTTGATGGAACAGGCACCTTCCAAACTGCAACTGTTGCTGCTGTTGGGGATTGGTTTATAGCTCAGGACATTGGATTCCAAAACACGGCAGGTCCACAGAAGCATCAGGCAGTTGCTCTGCGCGTCGGCTCTGATCGATCTGTCATTAACCGTTGCAAAATTGATGCATTTCAAGACACTCTATACGCACACACCAACCGACAATTTTACCGTGACTCCTTCATTACCGGTACCATTGACTTTATCTTTGGAGACGCAGCTGTTGTGTTGCAGAAGTGCAAACTCGTGGCCCGAAAGCCCATGGCCAACCAAAACAACATGGTCACAGCCCAGGGTCGAATAGACCCAAACCAGAACACCGCAACTTCAATTCAGCAATGCGATGTAATCCCAAGCACGGACCTCAAACCTGTGATAGGCTCCGTCAAAACCTACTTAGGCCGCCCATGGAAGAAATACTCCAGGACTGTTGTGATGCAGTCCTTGTTAGGAGCCCACATTGACCCAACAGGATGGGCAGAATGGGATGCCGCGAGCAAGGACTTTCTCCAAACACTGTATTACGGAGAGTACATGAACAGCGGACCCGGTGCTGGTACCAGCAAGAGAGTGAAATGGCCTGGTTATCATATCATCAATACTGCCGAGGCGAACAAGTTTACAGTGGCCCAACTCATCCAAGGTAATGTTTGGTTGAAGAACACTGGAGTGGCCTTCATCGCAGGCCTGTAG 1662 0.4543 MATQETLLHKPRKSIPKTFWLVLSLAAIISSSALIISHLNKPISIFHFSSAPNVCEHAVDTNSCLTHVAEVVQGSTLDNTKDHKLSTLISLLTKSTTHIRKAMDTANVIKRRINSPREENALNVCEKLMNLSMERVWDSVLTLTKDNMDSQQDAHTWLSSVLTNHATCLDGLEGTSRAVMENDIQDLIARARSSLAVLVAVLPPKDHDEFIDESLNGDFPSWVTSKDRRLLESSVGDVKANVVVAKDGSGKFKTVAEAVASAPNKGTARYVIYVKKGIYKENVEIASSKTNVMLLGDGMDATIITGSLNYVDGTGTFQTATVAAVGDWFIAQDIGFQNTAGPQKHQAVALRVGSDRSVINRCKIDAFQDTLYAHTNRQFYRDSFITGTIDFIFGDAAVVLQKCKLVARKPMANQNNMVTAQGRIDPNQNTATSIQQCDVIPSTDLKPVIGSVKTYLGRPWKKYSRTVVMQSLLGAHIDPTGWAEWDAASKDFLQTLYYGEYMNSGPGAGTSKRVKWPGYHIINTAEANKFTVAQLIQGNVWLKNTGVAFIAGL* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1130 553 PANTHER PECTINESTERASE 21 551 - -
Mtr7g1130 553 SUPERFAMILY Pectin lyase-like 239 552 IPR011050 -
Mtr7g1130 553 CDD PMEI-like_4 57 201 - -
Mtr7g1130 553 Gene3D - 235 553 IPR012334 -
Mtr7g1130 553 TIGRFAM PME_inhib: pectinesterase inhibitor domain 49 179 IPR006501 GO:0004857
Mtr7g1130 553 ProSitePatterns Pectinesterase signature 2. 385 394 IPR033131 -
Mtr7g1130 553 Pfam Plant invertase/pectin methylesterase inhibitor 53 189 IPR006501 GO:0004857
Mtr7g1130 553 PANTHER PECTINESTERASE 21 551 - -
Mtr7g1130 553 Pfam Pectinesterase 241 539 IPR000070 GO:0030599|GO:0042545
Mtr7g1130 553 SMART PMEI_2 47 197 IPR006501 GO:0004857
Mtr7g1130 553 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 180 IPR035513 -
Mtr7g1130 553 ProSitePatterns Pectinesterase signature 1. 266 285 IPR018040 -
Mtr7g1130 553 Gene3D Invertase/pectin methylesterase inhibitor family protein 52 201 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1130 Mtr-Chr7 24268871 24270774 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1130 3 549 Carbohydrate Esterase AT1G11580 52.669 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1130 K01051 - gmx:100815836 827.394