Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1128 ATGGCTATCCAACAATCTTTGCTAGACAAGCCAAGAAAATCCATTCCAAAAACATTTTGGTTAGTCCTCTCTTTAGTTGCTATCATAAGTTCATCAGCCCTTATTATTTCTCATCTAAATAAACCTATCTCCTTCTTCAATCTCTCCTCAGCTCCTAATCTATGTGAGCATGCTCTTGATACAAAATCATGCTTAACTCATGTATCAGAAGTTGTTCAAGGTTCTACCTTGTCCAATACCAAAGACCACAAATTGAGTACACTCGTATCGTTATTAACCAAATCCACCGCACACATTCGAAAGGCAATGGACACGGCTAATGTGATCAAACGCCGAGTTAATAGCCCTAGAGAGGAAATTGCTTTGAATGACTGTGAGGAATTAATGGATTTGTCCATGGATAGAGTTTGGGACTCAGTGTTGACTCTAACCAAAAATAACATTGACTCACAGCATGATGCACACACATGGCTAAGTAGTGTGCTCACTAACCATGCAACTTGTTTGGATGGATTAGAAGGTTCATCTCGGGTCGTTATGGAGAGTGATCTTCATGACTTGATCTCCAGAGCTAGATCTTCTCTTGCCGTGCTTGTTTCTGTCTTGCCTCCAAAGGCTAACGACGGATTCATTGATGAAAAATTGAATGGTGACTTTCCCTCTTGGGTGACAAGTAAGGATCGAAGACTTTTGGAATCTTCAGTTGGGGATATAAAGGCCAATGTTGTGGTGGCTCAGGACGGCAGCGGCAAGTTCAAGACTGTGGCTCAAGCTGTAGCATCTGCACCAGACAACGGTAAGACAAGGTATGTTATATATGTGAAAAAGGGAACATACAAAGAGAACATTGAAATTGGCAAGAAAAAGACAAATGTGATGCTTGTGGGTGATGGTATGGATGCAACAATAATCACAGGCAGCTTAAATTTCATCGATGGAACAACCACCTTCAAAAGTGCAACTGTTGCTGCTGTTGGAGATGGGTTTATAGCTCAGGACATTAGGTTCCAAAACACAGCAGGCCCACAGAAGCACCAGGCAGTTGCTCTTCGTGTCGGCGCTGATCAATCCGTCATCAACCGCTGCAAAATTGATGCATTTCAAGACACTCTCTATGCACACTCCAACCGACAATTTTACCGTGACTCATACATTACCGGTACCGTTGACTTTATCTTTGGAAACGCAGCTGTTGTTTTCCAGAAGAGCAAACTTGCGGCCCGAAAACCCATGGCCAACCAAAAAAACATGGTCACTGCCCAAGGTCGAGAAGACCCAAACCAGAACACTGCAACTTCAATTCAGCAATGTGACGTAATACCAAGCTCAGACCTCAAGCCTGTGCAAGGCTCCATCAAAACATACCTAGGCCGCCCATGGAAAAAATACTCCAGGACCGTTGTGTTGCAGTCCGTCGTGGACGGCCACATTGACCCAGCAGGATGGGCTGAATGGGATGCCGCTAGTAAGGACTTTCTGCAAACATTGTATTACGGAGAGTACATGAATAGTGGAGCAGGTGCTGGTACCGGTAAGAGAGTGACTTGGCCAGGTTATCATATCATAAAAAATGCTGCAGAGGCAAGCAAGTTTACAGTAACACAGCTCATCCAAGGAAATGTTTGGTTGAAGAACACAGGGGTGGCCTTCATTGAAGGCCTGTAG 1665 0.4414 MAIQQSLLDKPRKSIPKTFWLVLSLVAIISSSALIISHLNKPISFFNLSSAPNLCEHALDTKSCLTHVSEVVQGSTLSNTKDHKLSTLVSLLTKSTAHIRKAMDTANVIKRRVNSPREEIALNDCEELMDLSMDRVWDSVLTLTKNNIDSQHDAHTWLSSVLTNHATCLDGLEGSSRVVMESDLHDLISRARSSLAVLVSVLPPKANDGFIDEKLNGDFPSWVTSKDRRLLESSVGDIKANVVVAQDGSGKFKTVAQAVASAPDNGKTRYVIYVKKGTYKENIEIGKKKTNVMLVGDGMDATIITGSLNFIDGTTTFKSATVAAVGDGFIAQDIRFQNTAGPQKHQAVALRVGADQSVINRCKIDAFQDTLYAHSNRQFYRDSYITGTVDFIFGNAAVVFQKSKLAARKPMANQKNMVTAQGREDPNQNTATSIQQCDVIPSSDLKPVQGSIKTYLGRPWKKYSRTVVLQSVVDGHIDPAGWAEWDAASKDFLQTLYYGEYMNSGAGAGTGKRVTWPGYHIIKNAAEASKFTVTQLIQGNVWLKNTGVAFIEGL* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1128 554 Pfam Plant invertase/pectin methylesterase inhibitor 53 191 IPR006501 GO:0004857
Mtr7g1128 554 SUPERFAMILY Pectin lyase-like 239 553 IPR011050 -
Mtr7g1128 554 Gene3D - 235 554 IPR012334 -
Mtr7g1128 554 PANTHER PECTINESTERASE 21 552 - -
Mtr7g1128 554 SMART PMEI_2 46 197 IPR006501 GO:0004857
Mtr7g1128 554 CDD PMEI-like_4 57 201 - -
Mtr7g1128 554 TIGRFAM PME_inhib: pectinesterase inhibitor domain 44 180 IPR006501 GO:0004857
Mtr7g1128 554 ProSitePatterns Pectinesterase signature 2. 385 394 IPR033131 -
Mtr7g1128 554 Gene3D Invertase/pectin methylesterase inhibitor family protein 52 202 IPR035513 -
Mtr7g1128 554 Pfam Pectinesterase 241 540 IPR000070 GO:0030599|GO:0042545
Mtr7g1128 554 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 178 IPR035513 -
Mtr7g1128 554 PANTHER PECTINESTERASE 21 552 - -
Mtr7g1128 554 ProSitePatterns Pectinesterase signature 1. 266 285 IPR018040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1128 Mtr-Chr7 24230899 24233052 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1128 5 554 Carbohydrate Esterase AT1G11580 57.219 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1128 K01051 - gmx:100815836 865.144