Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1075 ATGGTTCATTCTCAACTAGGTTCAAATATTTCACCACCACCATCACATTACACCACATATTTGTACCAAAGTCAATGCAATCAACTTAAGAAAGATCTTTTGAATGAGGCCAACCATGACTCTAGTTTTTCTGCAATGGTTCCTTCCCCTATCAACCCATTCCCTTTGATCCCAACCCATCGGTACAAGGCTACTCACACCAATGGGTCTCAGAGAGAATTTATCAGTGCTCGAAATCCAATGGTCTTTTCACCAAACCATAATAAGATGGAAGACATACATGGTCGCCTTAACACTAGCAAAGGAATTTGGGATTTGTCTACAAAAAATATCTTTCAATATGGGGAAACTTCACAACCTTGGGTAAGTCCCTCTCTATCACCATCACTAGCTTATGATGCACATCAATCTGTGTCAGTTAATCCTGAGCTTCAAGGAGATCTTTCACGCAATGTTGGAATTGGAAACAAATCCCAAGAAAATGATCAACGATTTGTGCTAAGTGGCCAAAAGCGGCGGAAGAGGATTCAAAATAATAATGAAATTCAACACAAGGATCCCAATCAAATCAAGGGACAATGGACTTCAAATGAGGATCGGGTTCTTGTCCAATTGGTGGATCACTTTGGGCTTAGAAATTGGTCTCGTATTGCTAAGTTTCTGAAAGGAAGAATTGGAAAACAATGCAGAGAGAGATGGAATAATCATCTTCGACCAGACATTAAGAAGGATTCATGGACCGAAGAGGAAGACAAAATACTAATCGAAGCTCACAAAATAGTTGGAAACAAGTGGACTGAAATTTCAAGGAGATTGCCAGGGCGCACTGAGAACTCCATCAAGAACCACTGGAATGCCACTAAGCGTCGCCAAAATCCCAAGAGGAAGAACCGAGGTAAGAGTTCAAAGGGAATACTTCTTCTGAAATACATAATGGAAGTCACCGATGCTAAGGAAGTTGAAAAGGAGCCGATGACGTATTCTACGAGCATGATGGATATTAAAAATCAACTGAATTTTGAAAGCTCAAAGAGTGATTTTAGAACTGAAGGTTTGACTACTCCAGAGAACAAAATTTGTGAGTATGTTCCAATGATGTTCAATGGTGATGATGGAATGGCAAGTGGATCTGGTACCACAATGAATTATGAGTTTGGATCATATGGAATTGAGTTTTTTCCTGAGGTTCCTCTTAATCAAGAAATTGATCTCATGGAGATGATCAATAAAAACCCTTAA 1239 0.3947 MVHSQLGSNISPPPSHYTTYLYQSQCNQLKKDLLNEANHDSSFSAMVPSPINPFPLIPTHRYKATHTNGSQREFISARNPMVFSPNHNKMEDIHGRLNTSKGIWDLSTKNIFQYGETSQPWVSPSLSPSLAYDAHQSVSVNPELQGDLSRNVGIGNKSQENDQRFVLSGQKRRKRIQNNNEIQHKDPNQIKGQWTSNEDRVLVQLVDHFGLRNWSRIAKFLKGRIGKQCRERWNNHLRPDIKKDSWTEEEDKILIEAHKIVGNKWTEISRRLPGRTENSIKNHWNATKRRQNPKRKNRGKSSKGILLLKYIMEVTDAKEVEKEPMTYSTSMMDIKNQLNFESSKSDFRTEGLTTPENKICEYVPMMFNGDDGMASGSGTTMNYEFGSYGIEFFPEVPLNQEIDLMEMINKNP* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1075 412 Gene3D - 190 242 - -
Mtr7g1075 412 MobiDBLite consensus disorder prediction 276 301 - -
Mtr7g1075 412 CDD SANT 194 237 IPR001005 -
Mtr7g1075 412 ProSiteProfiles Myb-like domain profile. 186 237 IPR001005 -
Mtr7g1075 412 SUPERFAMILY Homeodomain-like 188 284 IPR009057 -
Mtr7g1075 412 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 186 241 IPR017930 -
Mtr7g1075 412 MobiDBLite consensus disorder prediction 287 301 - -
Mtr7g1075 412 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 242 292 IPR017930 -
Mtr7g1075 412 PANTHER MYB DOMAIN PROTEIN 100-RELATED 125 331 - -
Mtr7g1075 412 SMART sant 242 290 IPR001005 -
Mtr7g1075 412 SMART sant 190 239 IPR001005 -
Mtr7g1075 412 Pfam Myb-like DNA-binding domain 191 237 IPR001005 -
Mtr7g1075 412 Pfam Myb-like DNA-binding domain 243 285 IPR001005 -
Mtr7g1075 412 CDD SANT 245 288 IPR001005 -
Mtr7g1075 412 ProSiteProfiles Myb-like domain profile. 238 288 IPR001005 -
Mtr7g1075 412 Gene3D - 245 287 - -
Mtr7g1075 412 PANTHER MYB PROTEIN-RELATED 125 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1075 Mtr-Chr7 23588639 23592426 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1075 190 311 MYB Transcription Factor Family AT4G18770 71.311 5.22e-58 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr7g1075 Myb_DNA-binding 2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1075 K09422 - mtr:MTR_4g088015 598.971