LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr7g1071	ATGCAACTCCATAATCTTTGCATTGTTTTACCACAAAATTCAGGTGAAATAATGAAAGAACAACCTCCTCAATCTTCAAAGAAAGAAAAATCTAAGTTCAAAGTTCCTTCAAGGGCTTGTGGTGGAGGACAACAAGTTCTTGATTTGCTTCATGATTCATTGAGCAAGTTATGTAGCTCAAGATGGGTGGGAGGTGCAAAAAGAATTTACAAACATAAGGGGGTGCAAAAAGGAAAAAAGAAAAACTCTTCAAGTAAGGCTGTTTTTCATGACATGGATGGTGTACAATTTGCTGTCAAGATAGGAAGAGACAATCCAAGAATTTTCAGCTATGCAGAACTTTTTATAGGTTCTAATGGTTTCAATGAAGAACAAGTTCTAGGAAGTGGAGGCTTTGGAAAAGTGTACAAAGCACTTTTGCCAAGTGATGGAACTTTGGTTGCTGTGAAATGTTGTTTATCAGAGAAAGGTAAACAATTTGACAAGAGTTTCTTAGCTGAGTTAAACGCCGTGGCCGATCTTCGACATAAGAATCTTGTAAGGTTGAGAGGTTGGTGTGTTCATGAAGATCAATTACATCTTGTTTATGATTACATGCCTAACCGAAGCCTTGACCGAGTACTTTTTCGTCGGCTGGAGAATTTAAAGAATGAGCCACTTGGTTGGGGACAAAGAGGTAAAATAGTTAAAGGTTTGGCTGCTGCATTGTATTATCTGCATGAACAGTTAGAGACTCAAATCATTCATAGAGATGTTAAAACAAGTAATGTTATGCTTGATTCTCATTACAATGCTAAGTTAGGTGATTTCGGCATGGCAAGGTGGTTAGAACATGAACTTGAATATGAGTTCAAGTACAAGTACAATTACAGCAGCAACAATAAGAAGACATCAAGTAGAATTGATCATTTCAAATTGGGAGAAACATCGAGAATTGGCGGAACGATTGGTTATCTTCCACCAGAAAGCTTGCAAAAACCAAGCAACGGAACTTCCAAATGCGATGTATTTAGTTTTGGTATTGTTGTGCTTGAAATTGTATCTGGAAGGAGAGCAATAGATCTATCATATTCTGATGATAAAATCATTTTGATTGATTGGATCAGAAGGCTTTGTGATGAAGGAAAGCTTCTAGAAGCAGCTGATACAAGGCTACAAAAAAATGGATCATATAATTTTTCTGAGATGAAGCATTTCATTCATATAAGTCTTCTTTGCACACTTCATGATCCAAATTTGAGGCCTAATATGAAATGGGTTGTGGAAGCACTTTCTGATTTAAGTTTCAAACTTCCTTCACTTCCTTCATTTCTATCTCATCCTCTTTATATCTCTTTGTCTTCACCTTCTGAAACTACCAATACTAGTAGCACAAGTGGCACGATGTCGGCCGCTGAAAATCTTAGCTTAATCACAAACTATAGTTCATCAAACTATGTTACAGCTGCAGGTGAAACAGTTTATGTAACAGCTGAACAGAAAAACAGTGGAATCAGGTCTTCTAAGAGCATGAATCAGAATCATTACAAGCCAAATTTTCCTGTGGTTGAAACTCCAAGAGAAATTTCATACAAAGAGATTGTTTGTGCTACAAGTAACTTCTCCGAGTCGAGAAGGGTAGCAGAACTTGACTTTGGAACTGCTTATCATGGAATCCTCGACGACAATTGTCATGTTTTGGTGAAAAGGTTAGGGATGAAGACATGTCCTGCGCTGCGGGATAGATTCTCAAACGAACTCAGGAATCTAGGAAAGCTTCGACATCGGAATTTGGTTCAGCTTCGCGGATGGTGCACCGAACAAGGAGAGATGCTTGTGGTTTATGATTACTCGGCTAGCAGAATTCTCAGTCAACAACTTCAACAAATTCATAACAAAAGCAGGAACGATTATCGATGTTCGGTACTCGAATGGCAGCATAGGTACAACATAGTGAAATCACTTGCTTCTGCAGTTCTTTATCTACATGAAGAATGGGATGAACAAGTGATTCACAGAAACATTACCTCTTCAGCTGTAATTCTTGAACAAGATATGAATCCAAGACTTAGTAGTTTTGCTCTAGCTGAATTTTTATCAAGAAATGAGCATGGCCACCATGTAGTCAATGATACTTCCAAATCAGTTAAAGGGATTTTCGGTTATATGTCACCGGAATATGTCGATTCAGGCGAAGCCACCTCGGCAGCCGATGTTTATAGTTTTGGTGTGGTGGTACTTGAAATTGTTAGTGGAATGATGGCGGTGGATTTCAGGTACCAAGAGGTTCTTTTGGTGAAGAAGGTTCATGAATTTGTGATAAGAAAAAGACCATTGAAGGAATTAGCTGATATAAGACTCAATGGAGAGTATAAAGAGAAAGAATTGATAAGATTGGTAAGATTAGGAATTGCATGCACTAGTTGTGATCCTCAATTAAGACCAAGCATGAGACAAATTGTGAGCATTCTTGATGGAAATGACAAATTACTCAACATGAAGAACAAGGAAAGTAGGGAAGAATGGAGAGACAGAAATGCTTGTTCTTTATCAATGATTCGGAGAATTCAAGCTCTAGGAATACAGTAA	2568	0.3793	MQLHNLCIVLPQNSGEIMKEQPPQSSKKEKSKFKVPSRACGGGQQVLDLLHDSLSKLCSSRWVGGAKRIYKHKGVQKGKKKNSSSKAVFHDMDGVQFAVKIGRDNPRIFSYAELFIGSNGFNEEQVLGSGGFGKVYKALLPSDGTLVAVKCCLSEKGKQFDKSFLAELNAVADLRHKNLVRLRGWCVHEDQLHLVYDYMPNRSLDRVLFRRLENLKNEPLGWGQRGKIVKGLAAALYYLHEQLETQIIHRDVKTSNVMLDSHYNAKLGDFGMARWLEHELEYEFKYKYNYSSNNKKTSSRIDHFKLGETSRIGGTIGYLPPESLQKPSNGTSKCDVFSFGIVVLEIVSGRRAIDLSYSDDKIILIDWIRRLCDEGKLLEAADTRLQKNGSYNFSEMKHFIHISLLCTLHDPNLRPNMKWVVEALSDLSFKLPSLPSFLSHPLYISLSSPSETTNTSSTSGTMSAAENLSLITNYSSSNYVTAAGETVYVTAEQKNSGIRSSKSMNQNHYKPNFPVVETPREISYKEIVCATSNFSESRRVAELDFGTAYHGILDDNCHVLVKRLGMKTCPALRDRFSNELRNLGKLRHRNLVQLRGWCTEQGEMLVVYDYSASRILSQQLQQIHNKSRNDYRCSVLEWQHRYNIVKSLASAVLYLHEEWDEQVIHRNITSSAVILEQDMNPRLSSFALAEFLSRNEHGHHVVNDTSKSVKGIFGYMSPEYVDSGEATSAADVYSFGVVVLEIVSGMMAVDFRYQEVLLVKKVHEFVIRKRPLKELADIRLNGEYKEKELIRLVRLGIACTSCDPQLRPSMRQIVSILDGNDKLLNMKNKESREEWRDRNACSLSMIRRIQALGIQ*	856

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr7g1071	855	Pfam	Protein tyrosine and serine/threonine kinase	539	817	IPR001245	GO:0004672\|GO:0006468
	Mtr7g1071	855	Gene3D	Transferase(Phosphotransferase) domain 1	617	843	-	-
	Mtr7g1071	855	PANTHER	RECEPTOR LIKE PROTEIN KINASE S.2	1	854	-	-
	Mtr7g1071	855	ProSiteProfiles	Protein kinase domain profile.	534	824	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr7g1071	855	Gene3D	Transferase(Phosphotransferase) domain 1	199	430	-	-
	Mtr7g1071	855	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	247	259	IPR008271	GO:0004672\|GO:0006468
	Mtr7g1071	855	ProSitePatterns	Protein kinases ATP-binding region signature.	127	150	IPR017441	GO:0005524
	Mtr7g1071	855	Pfam	Protein kinase domain	121	419	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr7g1071	855	PANTHER	-	1	854	-	-
	Mtr7g1071	855	Gene3D	Phosphorylase Kinase; domain 1	94	198	-	-
	Mtr7g1071	855	Gene3D	Phosphorylase Kinase; domain 1	493	610	-	-
	Mtr7g1071	855	SMART	serkin_6	121	443	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr7g1071	855	SUPERFAMILY	Protein kinase-like (PK-like)	105	452	IPR011009	-
	Mtr7g1071	855	ProSiteProfiles	Protein kinase domain profile.	121	443	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr7g1071	855	SUPERFAMILY	Protein kinase-like (PK-like)	509	817	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr7g1071	Mtr-Chr7	23538564	23541537	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr7g1071	519	825	Receptor kinase-like Gene Family	AT3G59740	32.258	1.25e-44	169

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Mtr7g1071		Pkinase	1.9e-43	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr7g1071	-		-	gmx:100796108	1261.13