Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1067 ATGGCTGGTTTTTCTAGCAAGAATGTTCCGTTATTCGGTGTTTCGAGCAGAACTCGTAGCAAGAATGTTCCGTTGTTTGGTTCTCTTTTACTTGGTGGGTCATCAAAGCGGAGAAAGAGTGATGAAGAAGATAAGGGTTTGGAATATGTTTCTGGTTCTAAAAAAAGAAAGATGACTGAAGAACCTTTTGTTGTTCCTGCAGATGCCGAGGTAATTTCCATCGATGATGATGAATATGAAGATGTTGGTGAAGAAGGGTTGGAACATAGTGATGAGAAGATGTCTGAGGGTGGTGGTGAAAGTGGAGGAAGTGATTTTGATGCTAAAGATGGAAAGTTTGTTGATGAAAAGTGTGGGGCACAAGATAACCTGATTTCGATAAATTCAGATGAGTATGGTGAAAGTGAAGAACACTCTGTTGATTCTGATCCTGATAACGAAGAAGAAGAAAAAGAAAAAGAAAAAGCAGATGATGTTGTTAAAAGTGATGAAAGTGGGGGAATTGGTAGGTTTTCTGATCAAGGTGAAAAGGTTATAATTGATTTGGATGATTCTGAAGAGAGTAAGGAGGATGATTCGGATAAGAGTGAAGCAAATGATTCTAGTGATGAAGATTTTGAAGAAGAGGAGGAGGAGAAAGAGGGTTATAGGAAAGATTTCAATGTGGTGGAGGAGTTGGTAAGAAAGGTGAAGAGTCAAAAAAGGGGAATTTCTGAGAGTAATAATGAGGAAGTAAATGTTGAGAATAGTTCATCTTCTGATAATGATGATGAGGAGATGGTGAGAGAGGGGAAGGATAAAAAAAGTAGAATTTCTGAGAGGAAATGTGAGGAGGTAGAGAATGAGAGCAATCCATCTTCCACAAATATTGATGAGTTGGAGCAAGCCGACCATGCTAGTGTTTCCTCCTGTACCATTGAGAAGAAGGGTAGTTCTTCTTCTAAGCTGAATGGAGTACCAGAGACACTGAAACGAAAGAGTGTGGAAGGGAAAGTGAAAAATCTCTCTGATGAATGTGTGAATGTTGAAGTGAATGCCAAATCAGAAAACAAATCCAAGGAAAATGTTGGCGACTCTGATGGAGGAAAAGATCAATTTGTTAAAGGCTTAGATGTTGGAGGAGTTTCTTCATTTCAAATAAAGCAAGAAAAGATGAAGGAATCAGATAAACAGAAAACAATGGAGAACAAAAGAAGGGATTATAAAGGTAGAGCTGACATCTGTAATGGTGAGAAGAAGGAATCAACTGATAACAATGGATTGAATCAAAGCGTCAAAAGCACACATTTTACGCGCAAGGAGTTACGTTCACTCGAACTCCTTGTTAAATGCTATTGGGAAAGAAAGAATTTCATGAACAATGATTCAATTGTGTTAGAGGTCAACGACGATGGTGTTGATCAGCATCATACACGGCCACCACCAGTCTCTGTGGAGACACCTCGTGAACGGATATGGAGCCTTAAAAAGGTGGACATCGTGCAAAAGACCAAGGAGGAAGAGGAGGAGGAACTGTTATGGGATGAATTTGATACAGCCAGTAGAGAATCTAACGCTGAATCCATGATTGGAAATTTAGGAGAAAACGGAGGTCCATCATTCCACTGTGAACATGATACTTTTCTCGATGAAGAGATTGGTCTATTTTGCAAATTGTGTCATGAGGTTGTTACTGAGATCAAATATATCTCACCACCCGTGAATGATAGATGTCCCGATAAAGGTTCTGGAAAGAGGGCTTTATCTGATGATTCAGTAAATGCCTCGCTATTTGATGGCTCTCAGTTCAATGTTTCTGATGGTGATTCAGATGCTAATTTGTTTCTTGAAGGCTCAGTTTGGGACCTAATTCCTGATGTGAAAGAAAAATTATATCCTCATCAACAAGAAGGATTTGAATTCATTTGGAAAAACTTGGCAGGAAACATTGAGCTTCAAAAGTTAAAGAATGCCGATCCTCGAAGGGAAGGTGGCTGCATTATTTCACATGCTCCTGGAACTGGTAAGACAAGGTTGACAATAGAGTTTCTCAAGGCGTATTTGAAAGTTTTTCCGGGATGCTTGCCGATTATTGTTGCACCTGCAAGTTTGTTGCTTACTTGGGAATATGAGTTCAAAAAGTGGGAAATAGGTGTTCCATTTCACAATTTGAACAACTCTGAGTTATCTGTTAAAGATCATGAAGATGTTTTTAATGCAAATAATTGGTCTAATACACGGCAAAGTACAGAGGAGACGCGGATGATGAAACTGATTTCGTGGTTTAAAGCCAAGAGCATTCTGGGAATCAGTTACAGTTTGTACGAGAAGATAGCCGGAGGAGGGGAATATGGAGATGGAGATGAGAAAAAGAGAAAACGTGCAAGTGCGGACAAGAGAAAAGAAAACAGTTGTATGAGAAAGGTTTTACTTGAAACTCCTGGTTTGTTGGTTCTAGACGAAGGACATACACCGAGAAATAAAAATAGTCTTATTTGGAAGGTGTTGTCGAAAATTCAAACGCGCAAGCGAATCATCCTTTCTGGAACTCCTTTCCAGAACAATTTCTTGGAACTATACAACACTTTGAGCTTGGTGAGGCCTTCTTTTCATAAAACGATACCGCAAGAGCTGAAAAAGTTTTGCCAGAAGCAGGAACGTAAAAAAGCTCCTAAAGAATGGAGTTGGGAACCGGTTTTTGGCAACACAGCAGGTAATACTTCTGACGATAAGATCAAGCAGTTGAAATTGCTTATGGATCCCTTTGTTCATGTTCACAAAGGCGCGATCCTACAAAAGAAGCTTCCTGGGTTAAGAGATTGTGTGCTGTGTTTGAAGCCGGATAGTTTTCATAAGCAAATTCTTGAGAGTTTTAAAAGTTCTCAGAACTCATTCATCTTGGAGAATAAGCAGACACTGGCGTCGATCCATCCATCTCTTCTCCTCGAGTGCAAATTTTTAACAGAAGAAGAATCTTTTGTTGACAAGGACCGTCTAGAAAAGCTTAGATTGGACCACAATGCAGGCGTCAAAACAAAGTTTTTGTTGGAGTTTGTTAATCTTTGTGCTGCTCACAATGAGAAAACCAATTAA 3072 0.3945 MAGFSSKNVPLFGVSSRTRSKNVPLFGSLLLGGSSKRRKSDEEDKGLEYVSGSKKRKMTEEPFVVPADAEVISIDDDEYEDVGEEGLEHSDEKMSEGGGESGGSDFDAKDGKFVDEKCGAQDNLISINSDEYGESEEHSVDSDPDNEEEEKEKEKADDVVKSDESGGIGRFSDQGEKVIIDLDDSEESKEDDSDKSEANDSSDEDFEEEEEEKEGYRKDFNVVEELVRKVKSQKRGISESNNEEVNVENSSSSDNDDEEMVREGKDKKSRISERKCEEVENESNPSSTNIDELEQADHASVSSCTIEKKGSSSSKLNGVPETLKRKSVEGKVKNLSDECVNVEVNAKSENKSKENVGDSDGGKDQFVKGLDVGGVSSFQIKQEKMKESDKQKTMENKRRDYKGRADICNGEKKESTDNNGLNQSVKSTHFTRKELRSLELLVKCYWERKNFMNNDSIVLEVNDDGVDQHHTRPPPVSVETPRERIWSLKKVDIVQKTKEEEEEELLWDEFDTASRESNAESMIGNLGENGGPSFHCEHDTFLDEEIGLFCKLCHEVVTEIKYISPPVNDRCPDKGSGKRALSDDSVNASLFDGSQFNVSDGDSDANLFLEGSVWDLIPDVKEKLYPHQQEGFEFIWKNLAGNIELQKLKNADPRREGGCIISHAPGTGKTRLTIEFLKAYLKVFPGCLPIIVAPASLLLTWEYEFKKWEIGVPFHNLNNSELSVKDHEDVFNANNWSNTRQSTEETRMMKLISWFKAKSILGISYSLYEKIAGGGEYGDGDEKKRKRASADKRKENSCMRKVLLETPGLLVLDEGHTPRNKNSLIWKVLSKIQTRKRIILSGTPFQNNFLELYNTLSLVRPSFHKTIPQELKKFCQKQERKKAPKEWSWEPVFGNTAGNTSDDKIKQLKLLMDPFVHVHKGAILQKKLPGLRDCVLCLKPDSFHKQILESFKSSQNSFILENKQTLASIHPSLLLECKFLTEEESFVDKDRLEKLRLDHNAGVKTKFLLEFVNLCAAHNEKTN* 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1067 1023 Gene3D - 610 892 IPR038718 -
Mtr7g1067 1023 SMART ultradead3 620 870 IPR014001 -
Mtr7g1067 1023 Pfam SNF2-related domain 642 965 IPR000330 GO:0005524|GO:0140658
Mtr7g1067 1023 MobiDBLite consensus disorder prediction 136 152 - -
Mtr7g1067 1023 MobiDBLite consensus disorder prediction 282 320 - -
Mtr7g1067 1023 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 13 1021 IPR044567 GO:0080188
Mtr7g1067 1023 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 650 862 IPR014001 -
Mtr7g1067 1023 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 614 884 IPR027417 -
Mtr7g1067 1023 MobiDBLite consensus disorder prediction 35 63 - -
Mtr7g1067 1023 MobiDBLite consensus disorder prediction 213 238 - -
Mtr7g1067 1023 MobiDBLite consensus disorder prediction 346 366 - -
Mtr7g1067 1023 MobiDBLite consensus disorder prediction 31 326 - -
Mtr7g1067 1023 Coils Coil 199 243 - -
Mtr7g1067 1023 MobiDBLite consensus disorder prediction 255 281 - -
Mtr7g1067 1023 MobiDBLite consensus disorder prediction 86 117 - -
Mtr7g1067 1023 MobiDBLite consensus disorder prediction 185 212 - -
Mtr7g1067 1023 MobiDBLite consensus disorder prediction 378 400 - -
Mtr7g1067 1023 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 4 13 1021 - -
Mtr7g1067 1023 MobiDBLite consensus disorder prediction 71 85 - -
Mtr7g1067 1023 MobiDBLite consensus disorder prediction 382 400 - -
Mtr7g1067 1023 MobiDBLite consensus disorder prediction 347 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1067 Mtr-Chr7 23411558 23415557 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Mtr7g1067 SNF2_N 3.1e-22 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1067 K10875 - gmx:100812737 602.053