Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1066 ATGTCTGGAGAGGTTAGGGACAGGCAATCCTTAATCAATAACTTCAATGATGCAAACAGCCAATCGAAGATTCTCCTTGCATCAACGAGAGCTTGTTCCGAGGGAATCAGCTTAGTTGGAGCTTCTAGAGTTGTGCTACTCGATGTCGAATGGAATCCTTCGGTTGAAAAACAGGCCATCAGCAGAGCTTATCGGATTGGACAGAAGAAGGTTGTCTACACATATCATCTGCTCACTCAAGGGACTAAAGAGTGTGATAAATATTGCAAACAGGCAGAAAAGCACCGGTTGTCTGAACTAGTTTTTTCGGCTAAAAATGCCGATAATCATAATGAGCCGAAGAACTGTGCAGCGGACATTGAAGATAGAATTCTTGATCTAATGATTCGGCACGAAAATCTCAAAGACATGTTTGTTGAGTGTGTGGTACAGCCGAAGGAGCGAGAATTTGAGAGTTTTGGCTATTGA 468 0.4274 MSGEVRDRQSLINNFNDANSQSKILLASTRACSEGISLVGASRVVLLDVEWNPSVEKQAISRAYRIGQKKVVYTYHLLTQGTKECDKYCKQAEKHRLSELVFSAKNADNHNEPKNCAADIEDRILDLMIRHENLKDMFVECVVQPKEREFESFGY* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1066 155 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 4 4 151 - -
Mtr7g1066 155 Pfam Helicase conserved C-terminal domain 6 67 IPR001650 -
Mtr7g1066 155 Gene3D - 1 152 IPR027417 -
Mtr7g1066 155 CDD SF2_C_SNF 5 78 - -
Mtr7g1066 155 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 137 IPR027417 -
Mtr7g1066 155 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 128 IPR001650 -
Mtr7g1066 155 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 4 151 IPR044567 GO:0080188
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1066 Mtr-Chr7 23411018 23411609 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1066 6 97 RAD5 or RAD16-like Gene Family AT5G43530 40.217 1.58e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1066 K10875 - gmx:100812737 211.846