Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1063 ATGACCAAGACTAAGCCCTCCTCTTCCACTACGAACCCAAAACACAAACCATTTCAAGTCTCCAACAGGAACTTTAATGAAAGAGCATTGTTGTTCAAGAATGTCAGCACCAGGAGACTATTGTCAAAGGTTCAAAGTAACACTGAAACACCAATCAAGAAACTGCATTTAAAACGTCGTTGTGAAGATGCAACTTCAGGTAACATGCCGTCTTTGACTTCCGATGACTCCAGAAGAAAGAAAGTAAAAACTACATTAGGTAATTTCCGTGCTCTCTGTGGAAAACTCGGTAACGAATTTACCGGTGACGCGCTTCCTATCAAAGTGTCAGGGATTCTAAGACAAAGAGGCAAATTCATTCACGATGGAAAAAAAATTATCGGAAAAGTCTCTGGAATTGAAGTGGGTGACAAGTTTCTTTATTGGCAAGAACTCAATGTTGTTGGTCTTCATCGTCAGAATTTAAGTCTCATTGATCACGTGTTAAAGAATCAGAATTTGATTGCAACTAGCGTTGTTTCTTGTCATTTTGATGATATGGATGATACAAACGTGTTCGTTTATACAGGGGAAGGAAGTAAAGTTAGTAATTTTGGGAAACTTGCTCTGATGAATAGTTATCATGTTAAGAATCCCATTAGAGTTATTATAAATTTTAATTCAAAGAACGGTGGTGATGGTGAGGTGTATTGTTACTATGGTCTTTATAAAGTTGAATCAATTTGGAAAAAAAAAAAAGGGAAATTAGATTTTAAATTTTGTTTGCTTAGATTGCCGGATCAGAAATCTTTTGTTAAAGATATTTCCAATGGAAAAGAAGCTATTCCTATATGTGTGGTTAATCATATAGATTCCGGCAAGGTTCCATATTTTCAATACATTACTCGTAACATTTACCCTGAATGTGTTTTCAATGATTCCTCTGTTGGGCATAAATGTGCTGATCAATGTTCTGATTCATTGAAATGTTCCTGTGCTCTTAAGAGTGGAGGTAAAATTACTAGAGTAAAGAAAAATGAGATTAAATTTAAGCTTCAAATTTTCAAAACTAAGGCGAAAGGATGGGGTGTAAGGTCAGAGAATGCAATTCCTTCTGGAAATTTTATTTGTGAGTATATAGGTGAGATTATTGAAGATGAGGAAGCTTTGAAGATAGTTGATGATGATGATTCAAGGGAAGAGGATTCATATATGGTTGATAGTAAGGAGATGAGTTCATATCAACCCGTAGAAGCTTCAGGCAGTAAAGAGGTCATTGATGATCGATGTGATAGTGGTAGGTTTAACATTGATGCCGCTAAGTATGGTAACGTGGGAAGGTTTATCAACCATAGTTGCTCTCCCAATTTGTTTGCTCGAAATGTTCTTTACGATGATGATGTTCCAAGGATTCCACATATCATGCTGTATGCAGCTGAGAACATTCCGAGCATGAAAGAGCTGACTTTAGATTACAATTACAAGATCAATCAAGTGACTGATTCAAATGGAAATTTAAAGACGAAAGTATGTTATTGTGAAGCTTCTGCATGCATCCATCGACTGTATTGA 1551 0.3611 MTKTKPSSSTTNPKHKPFQVSNRNFNERALLFKNVSTRRLLSKVQSNTETPIKKLHLKRRCEDATSGNMPSLTSDDSRRKKVKTTLGNFRALCGKLGNEFTGDALPIKVSGILRQRGKFIHDGKKIIGKVSGIEVGDKFLYWQELNVVGLHRQNLSLIDHVLKNQNLIATSVVSCHFDDMDDTNVFVYTGEGSKVSNFGKLALMNSYHVKNPIRVIINFNSKNGGDGEVYCYYGLYKVESIWKKKKGKLDFKFCLLRLPDQKSFVKDISNGKEAIPICVVNHIDSGKVPYFQYITRNIYPECVFNDSSVGHKCADQCSDSLKCSCALKSGGKITRVKKNEIKFKLQIFKTKAKGWGVRSENAIPSGNFICEYIGEIIEDEEALKIVDDDDSREEDSYMVDSKEMSSYQPVEASGSKEVIDDRCDSGRFNIDAAKYGNVGRFINHSCSPNLFARNVLYDDDVPRIPHIMLYAAENIPSMKELTLDYNYKINQVTDSNGNLKTKVCYCEASACIHRLY* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1063 516 SUPERFAMILY PUA domain-like 112 264 IPR015947 -
Mtr7g1063 516 SMART preset_2 265 353 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mtr7g1063 516 Pfam SET domain 354 486 IPR001214 GO:0005515
Mtr7g1063 516 ProSiteProfiles YDG domain profile. 128 260 IPR003105 -
Mtr7g1063 516 ProSiteProfiles SET domain profile. 343 486 IPR001214 GO:0005515
Mtr7g1063 516 SMART G9a_1 123 261 IPR003105 -
Mtr7g1063 516 MobiDBLite consensus disorder prediction 60 79 - -
Mtr7g1063 516 Pfam SAD/SRA domain 127 261 IPR003105 -
Mtr7g1063 516 SMART set_7 343 492 IPR001214 GO:0005515
Mtr7g1063 516 Pfam Pre-SET motif 268 336 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mtr7g1063 516 Gene3D SET domain 264 516 IPR046341 -
Mtr7g1063 516 SUPERFAMILY SET domain 259 492 IPR046341 -
Mtr7g1063 516 Gene3D - 125 263 IPR036987 -
Mtr7g1063 516 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6 15 514 - -
Mtr7g1063 516 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 15 514 - -
Mtr7g1063 516 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1063 Mtr-Chr7 23328523 23330115 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1063 116 516 EF-hand Containing Proteins AT5G13960 31.288 1.70e-58 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mtr7g1063 SAD_SRA 2.5e-25 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1063 K11420 - mtr:MTR_7g445710 891.338