Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr7g1058 | ATGACCAAGACTAAGCCCTCTTCTTCCACTACGAACCCACAACACAAACCATTTCAAGTCTCCAACAGGAACTTTACTGAAAGAGCATTGTTGTTCAAGAATGTCAGCACAAGGAGAGTATTGTCAAAGGTTCAAAGAAACACTGAAACCAAGGAAACACCAATCAAGAAACTGCATTTAAAACGTCGTTGTGAAGATGCAACTTCAGGTAACAAGCCGTCTTTGACTTCCGATGACTCCAGAAGAAAGAAAGTAAAAACTACATTAGGTAACTTCCGTGCTCTCTGTGGAAAACTCGGTAAGGAACTTACCACCGACGGGCTTCATATCGAAGTGTCACAGATTCTAAAAAACAGAGGAAAATTCATTCATGATGGGAAAAAAATTATTGGAAAGGTCTCTGGAATTGAAGATGGGAATTTGATTGCAACTAGCGTTGTTTCTTGTCATTTTGATGATATGGATGATACAAACGTGTTCGTATATACAGGGGAAGGAGGTAATGTCATTAATTCTGGAAAATGTGATGAAGAGACTCTTGCTCTTATGAATAGTTATCATGTTAAGAATCCTATTAGAGTTATTATAAAGTTTAATTCAAAGAACTGTGGTGGTGGTGCACGTGGTGGAGGTGAGGTGTATTGTTACTATGGTCTTTATAAAGTTGAATCAATTTGGAAAAAAAAAGGTAAATTAGATTTTAAATTTTGTTTGGTTAGATTGCCTGATCAGAAAATCTTTGTTAAAGATATTTCCAATGGAAAAGAAGCTGTTCCTATATGTGTGGTTAATCATATAGATTCTGGCAAGGTTCCATATTTTCAATACATTACTCGTAACATTTATCCTGAATGGCTTTTCAATGATTCCTCTGTTGGGCGTACATGTGTTGATCATTGTTCTGATTCAATGAAATGTTCCTGTGCTCTTAAGAGTGGAGGGAAAATTCCGAGCGTAAAGAAAAATGAGATTAAATTTAAGCTTCAAATTTTCAAGACAAAGGCGAAAGGATGGGGTGTGAGATCAGAGAATGCAATTCCTTCTGGAAATTTTATTATTTGTGAGTATTTAGGTGAGATTATTGAAGATGAGGAAGCTTTGAAAAAGGTTGATAATGATGAGTATTTATTTAATATTGGCAATTATATTCACAAGGTCTATAGTTCATGGGAAGAGGATTCATATGTGGTTGATAGTAAGGAGATGAGTTCATATCAACCCTTAGAAGCTTCGGGCGGTAAAGAGGGCGTTGATGATCGATGTGATAGTGGTAGGTTTACCATTGATGCTGCTAAGTATGGTAACGTGGCAAGGTTTATCAACCATAGTTGTTCTCCCAATTTGTTTGTTCGAAATGTTCTTTACGATGATGATGTTCCAAGGATTCCACACATCATGCTATATGCAGCTGAGAACATTCCGAGCATGAAAGAGCTGACTTTAGATTACAATTACAAGATCGATCAAGCGATTGATTCAAATGGAAATTTAAAGACGAAAGCATGTTATTGTGGAGCTTCTGAATGCATCCGTCGACTTTATTGA | 1545 | 0.3657 | MTKTKPSSSTTNPQHKPFQVSNRNFTERALLFKNVSTRRVLSKVQRNTETKETPIKKLHLKRRCEDATSGNKPSLTSDDSRRKKVKTTLGNFRALCGKLGKELTTDGLHIEVSQILKNRGKFIHDGKKIIGKVSGIEDGNLIATSVVSCHFDDMDDTNVFVYTGEGGNVINSGKCDEETLALMNSYHVKNPIRVIIKFNSKNCGGGARGGGEVYCYYGLYKVESIWKKKGKLDFKFCLVRLPDQKIFVKDISNGKEAVPICVVNHIDSGKVPYFQYITRNIYPEWLFNDSSVGRTCVDHCSDSMKCSCALKSGGKIPSVKKNEIKFKLQIFKTKAKGWGVRSENAIPSGNFIICEYLGEIIEDEEALKKVDNDEYLFNIGNYIHKVYSSWEEDSYVVDSKEMSSYQPLEASGGKEGVDDRCDSGRFTIDAAKYGNVARFINHSCSPNLFVRNVLYDDDVPRIPHIMLYAAENIPSMKELTLDYNYKIDQAIDSNGNLKTKACYCGASECIRRLY* | 515 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr7g1058 | 514 | Gene3D | SET domain | 246 | 514 | IPR046341 | - | |
| Mtr7g1058 | 514 | Pfam | SAD/SRA domain | 122 | 244 | IPR003105 | - | |
| Mtr7g1058 | 514 | Pfam | SET domain | 337 | 484 | IPR001214 | GO:0005515 | |
| Mtr7g1058 | 514 | SMART | G9a_1 | 126 | 244 | IPR003105 | - | |
| Mtr7g1058 | 514 | ProSiteProfiles | SET domain profile. | 326 | 484 | IPR001214 | GO:0005515 | |
| Mtr7g1058 | 514 | SMART | preset_2 | 248 | 336 | IPR007728 | GO:0005634|GO:0008270|GO:0018024|GO:0034968 | |
| Mtr7g1058 | 514 | Pfam | Pre-SET motif | 251 | 317 | IPR007728 | GO:0005634|GO:0008270|GO:0018024|GO:0034968 | |
| Mtr7g1058 | 514 | MobiDBLite | consensus disorder prediction | 61 | 83 | - | - | |
| Mtr7g1058 | 514 | ProSiteProfiles | YDG domain profile. | 86 | 243 | IPR003105 | - | |
| Mtr7g1058 | 514 | PANTHER | HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6 | 138 | 512 | - | - | |
| Mtr7g1058 | 514 | PANTHER | HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6 | 5 | 138 | - | - | |
| Mtr7g1058 | 514 | PANTHER | HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR | 5 | 138 | - | - | |
| Mtr7g1058 | 514 | PANTHER | HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR | 138 | 512 | - | - | |
| Mtr7g1058 | 514 | ProSiteProfiles | Post-SET domain profile. | 498 | 514 | IPR003616 | - | |
| Mtr7g1058 | 514 | Gene3D | - | 107 | 245 | IPR036987 | - | |
| Mtr7g1058 | 514 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
| Mtr7g1058 | 514 | SMART | set_7 | 326 | 490 | IPR001214 | GO:0005515 | |
| Mtr7g1058 | 514 | SUPERFAMILY | SET domain | 241 | 491 | IPR046341 | - | |
| Mtr7g1058 | 514 | SUPERFAMILY | PUA domain-like | 115 | 245 | IPR015947 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr7g1058 | Mtr-Chr7 | 23166983 | 23168613 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mtr7g1058 | 141 | 514 | EF-hand Containing Proteins | AT5G13960 | 31.223 | 2.54e-51 | 180 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TR | SET | Mtr7g1058 | SET | 5.1e-21 | No_clan |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mtr7g1058 | K11420 | - | mtr:MTR_7g445710 | 1037.33 |