Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1057 ATGACCAAGACTAAGCCCTCTTCTTCCACTACCAACCCACAACACAAACCATTTCAAGTCTCCAACTGGAACTTTACTGAAAGATCATTGTTGTTCAAGAATGTCAGCACAAGGAGAGTATTGTCAAAGGTTCAAAGAAACACTGAAACACCAATCAAGAAACTGCATTTAAAACGTCGTTGTGAAGATGCAACTTCAGGTAACAAGCCGTCTTTGACTTCCGATAACTCAAGAAGAAAGAAAGTCAAAACTACATTAGGTAACTTCCGTGCTCTCTGTGCAAAACTCGGTAAGGAACTTACCGCCGACGGGCTTCCTATTGAAGTGTCACGGATTCTAAAAAACAGAGGAAAATTCATTCATGATGGGAAAAAAATTATTGGAAAAGTCTCTGGAATTGAAGTAGGTGACAAGTTTCTTTATTGGCAAGAACTCAATGTTCTTGGTCTTCATCGTCAGAATTTAAGTCTCATTGATCACGTGTTAAAGGATGGGAATTTGATTGCAACTAGCGTTGTTTCTTGTCATTTTGATGATATGGATGATACAAACGTGTTCGTATATACAGGGGAAGGAGGTAATGTCATTAATTCTGGAAAATGTGATGAAGAGACTCTTGCTCTTATGAATAGTTATCATTTTAAGAATGCTATTAGAGTTATTATAAAGTTTAATTCAAAGAACTGTGGTGCTGGTGCACGTGGTGGAGGTGAGGTTTATTGTTACTATGGTCTTTATAAAGTTGAATCAATCTGGAAAAAAAAAGGGAAATTAGATTTTAAATTTTGTTTGGTTAGATTGCCTGATCAGAAAATCTTTGTTAAAGATATTTCCAATGGAAAAGAAGCTGTTCCTATATGTGTGGTTAATCATATAGATTCTGGCAAGGTTCCATATTTTCAATACATTACTCGTAACATTTATCCTGAATGGCTTTTCGATGATTCCTCTGTTGGGCGTAAATGTGTTGATCATTGTTCTGATTCAATGAAATGTTCCTGTGCTCTTAAGAGTGGAGGGAAAATTACTAGAGTAAAGAGAAATGAGATTAAATTTAAGCTTCAAATTTTCAAAACTAAGGCGAAAGGATGGGGTGTGAGATCAGAGAATGCAATTCCTTCTGGAAATTTTATTTGTGAGTATTTAGGTGAGATTATGGAAGATGAGGAAGCTTTGAAAAAGGTTGATAATGATGAGTATTTATTTAATATTGGAAATTATATTCGCAAGGTCTATAGTTCATGGGAAGAGGATTCATATATGGTTGATAGTAAGGAGATGACTTCATATCAACCCTTAGAAGCTTCAGGCGGTAAAGAGGTCGTTGATGATCGATGTGATAGTGGTAGGTTTACCATTGATGCTGCTAAGTATGGTAACGTGGCAAGGTTTATCAACCATAGTTGTTCTCCCAATTTGTTTGCTCGAAATGTTCTTTACGATGATGATGATCTGAGAATTCCACACATCATGCTATATGCAGCTGAGAACATTCCTAGCATGAATGAGCTGACTTTGAGTTACAATTACAAGATCGATCAAGTGATTGATTCAAATGGAAATTTAAAGACAAAAGCATGTTATTGTGGAGCTTCTGAATGCATCCGTCGACTGTATTGA 1620 0.3617 MTKTKPSSSTTNPQHKPFQVSNWNFTERSLLFKNVSTRRVLSKVQRNTETPIKKLHLKRRCEDATSGNKPSLTSDNSRRKKVKTTLGNFRALCAKLGKELTADGLPIEVSRILKNRGKFIHDGKKIIGKVSGIEVGDKFLYWQELNVLGLHRQNLSLIDHVLKDGNLIATSVVSCHFDDMDDTNVFVYTGEGGNVINSGKCDEETLALMNSYHFKNAIRVIIKFNSKNCGAGARGGGEVYCYYGLYKVESIWKKKGKLDFKFCLVRLPDQKIFVKDISNGKEAVPICVVNHIDSGKVPYFQYITRNIYPEWLFDDSSVGRKCVDHCSDSMKCSCALKSGGKITRVKRNEIKFKLQIFKTKAKGWGVRSENAIPSGNFICEYLGEIMEDEEALKKVDNDEYLFNIGNYIRKVYSSWEEDSYMVDSKEMTSYQPLEASGGKEVVDDRCDSGRFTIDAAKYGNVARFINHSCSPNLFARNVLYDDDDLRIPHIMLYAAENIPSMNELTLSYNYKIDQVIDSNGNLKTKACYCGASECIRRLY* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1057 539 ProSiteProfiles YDG domain profile. 128 269 IPR003105 -
Mtr7g1057 539 MobiDBLite consensus disorder prediction 58 80 - -
Mtr7g1057 539 Pfam SAD/SRA domain 127 270 IPR003105 -
Mtr7g1057 539 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6 49 537 - -
Mtr7g1057 539 SMART set_7 352 515 IPR001214 GO:0005515
Mtr7g1057 539 SMART G9a_1 123 270 IPR003105 -
Mtr7g1057 539 ProSiteProfiles Post-SET domain profile. 523 539 IPR003616 -
Mtr7g1057 539 Gene3D SET domain 272 539 IPR046341 -
Mtr7g1057 539 ProSiteProfiles SET domain profile. 352 509 IPR001214 GO:0005515
Mtr7g1057 539 SUPERFAMILY SET domain 267 515 IPR046341 -
Mtr7g1057 539 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 49 537 - -
Mtr7g1057 539 SMART preset_2 274 358 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mtr7g1057 539 Gene3D - 125 271 IPR036987 -
Mtr7g1057 539 SUPERFAMILY PUA domain-like 110 271 IPR015947 -
Mtr7g1057 539 Pfam Pre-SET motif 277 342 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mtr7g1057 539 Pfam SET domain 363 509 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1057 Mtr-Chr7 23044362 23045981 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1057 116 539 EF-hand Containing Proteins AT5G13960 30.478 1.74e-59 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mtr7g1057 SET 3.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1057 K11420 - mtr:MTR_7g445710 1036.17