Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1055 ATGGCTAATCTGAGAGAAGAACAAGATTTGAGTAAAGATGAAGTGGGTCAGTACTGGCAATCCTCATCTTTGGGGAAACTTGATTATATCCCACAGGAGGCACTAGAAAATTTGGAATGGTACACTACTTTTTGGGATGACATGGAGAAATTAGACAAGGTCATCAAATTGGATGAATTAAAGGGTGAGAGAAAAACACAAGAAAATCCATCTTTCAATGTGTCAAGTGTTCAGATTAATCATCAGAGAATTTGCAGCGATTCTGAGACGAAAGAAACTACTCAAAAGCCTCTGCGAAGGACTAAAGTGAAGTCATGTTCTATTAAGAAGAGTAGAGCCAAGAAATTCATAGGAGAGAGAAGTTGCAGCCATTGTGAGACGAAAGAGACTACTCAATGGAGGGAAGGTCCTTTGGGGAAAAATAGTTTGTGCAATGCATGTGGATTACGATACAAGTTAAATGGATTGGTTAAAGGGTATAGACCTAAGGCAAGTCCAGCTTTTGATATCAGAAATCATTCAAATTTACACAAGAAGGTGATGGGAAAGGAATGA 555 0.3856 MANLREEQDLSKDEVGQYWQSSSLGKLDYIPQEALENLEWYTTFWDDMEKLDKVIKLDELKGERKTQENPSFNVSSVQINHQRICSDSETKETTQKPLRRTKVKSCSIKKSRAKKFIGERSCSHCETKETTQWREGPLGKNSLCNACGLRYKLNGLVKGYRPKASPAFDIRNHSNLHKKVMGKE* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1055 184 ProSitePatterns GATA-type zinc finger domain. 122 147 IPR000679 GO:0006355|GO:0043565
Mtr7g1055 184 Gene3D - 117 180 IPR013088 GO:0006355|GO:0008270
Mtr7g1055 184 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 119 159 - -
Mtr7g1055 184 PANTHER GATA TRANSCRIPTION FACTOR 1 184 - -
Mtr7g1055 184 ProSiteProfiles GATA-type zinc finger domain profile. 120 171 IPR000679 GO:0006355|GO:0043565
Mtr7g1055 184 PANTHER GATA TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN 1 184 - -
Mtr7g1055 184 SMART GATA_3 116 170 IPR000679 GO:0006355|GO:0043565
Mtr7g1055 184 CDD ZnF_GATA 121 173 IPR000679 GO:0006355|GO:0043565
Mtr7g1055 184 Pfam GATA zinc finger 122 156 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1055 Mtr-Chr7 22962950 22963939 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1055 20 181 C2C2-Gata Transcription Factor Family AT4G34680 34.940 1.11e-24 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mtr7g1055 GATA 4.2e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1055 - - mtr:MTR_7g446070 336.65