Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1054 ATGGCTAATCTGAGAGAAGAACAAGATTTCAGTGAACATCAAGTCGATCAGTACTCGCAATCCTCATCTTTGGGGAAACTTGATTATATCCCACAGGAAGCACTAGAAAATTTGGAATGGTATACTACTTTTTGGGATGACATGGAGAAATTAGAAAAGGTCTTAAAATTCGATGAATCAATGGGTGAAGGAAACACACAAGAAAATCGATCTTTCAATGTGTCAAGTGTTCAGATTAATCAACAGGACAATATTGATACAAGTGTGCCTAATCATCATCAGAGAATTTGCAGCGATTCTGAGACGAAAGAAACTACTCAAAAGCCTCTGCGAAGGACTAAAGTGAAGTCATGTTCTATTAAGAAGAGTAGAGCCAAGAAATTCATAGGAGATAGAAGTTGCAGCCATTGTGAGACCAAAGAGACTACTCAATGGAGGGAAGGTCCTTTGGGGAAGAATAGTTTGTGCAATGCATGTGGATTACGATACAAGTTAAATGGATTGGTTAAAGGGTATAGACCTAAGGCAAGTCCAGCTTTCGATATCAGAAATCATTCAAATTTACACAAGAAGGCGATGCGAAAGGAATGA 591 0.3841 MANLREEQDFSEHQVDQYSQSSSLGKLDYIPQEALENLEWYTTFWDDMEKLEKVLKFDESMGEGNTQENRSFNVSSVQINQQDNIDTSVPNHHQRICSDSETKETTQKPLRRTKVKSCSIKKSRAKKFIGDRSCSHCETKETTQWREGPLGKNSLCNACGLRYKLNGLVKGYRPKASPAFDIRNHSNLHKKAMRKE* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1054 196 SMART GATA_3 128 182 IPR000679 GO:0006355|GO:0043565
Mtr7g1054 196 PANTHER GATA TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN 1 196 - -
Mtr7g1054 196 Coils Coil 1 21 - -
Mtr7g1054 196 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 131 171 - -
Mtr7g1054 196 Pfam GATA zinc finger 134 168 IPR000679 GO:0006355|GO:0043565
Mtr7g1054 196 ProSitePatterns GATA-type zinc finger domain. 134 159 IPR000679 GO:0006355|GO:0043565
Mtr7g1054 196 PANTHER GATA TRANSCRIPTION FACTOR 1 196 - -
Mtr7g1054 196 MobiDBLite consensus disorder prediction 1 23 - -
Mtr7g1054 196 CDD ZnF_GATA 133 185 IPR000679 GO:0006355|GO:0043565
Mtr7g1054 196 MobiDBLite consensus disorder prediction 87 109 - -
Mtr7g1054 196 Gene3D - 130 196 IPR013088 GO:0006355|GO:0008270
Mtr7g1054 196 ProSiteProfiles GATA-type zinc finger domain profile. 128 183 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1054 Mtr-Chr7 22926021 22927049 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1054 30 193 C2C2-Gata Transcription Factor Family AT3G60530 31.214 6.21e-23 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mtr7g1054 GATA 4.7e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1054 - - mtr:MTR_7g446070 407.527