Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1045 ATGAACAGAAAAAGCCTTCTGTTTACCTTTAAGCCCTTCTATTGTCCCCTGTTTTATTCATACATGACCCTTTTTTATCTTCTTACCACAACCACTCTATGCTCTATAGACACAAAATTTGAAGCTTGTGAACCCAAAACATGTGGCAACCAAAGTATAAGCTACCCTTTCTATATCAAAGGATTACAACAACCCTATTGTGGTTACCCTGGTTTCGGTCTCTCTTGTGACAATAATATTGGTTCCCCAATCCTCAATCTTTCTAACACAAAACACATAATCGACCAAATTTTCTATGAAAACCAATCATTAAGAGTGTCCAACAATGCTGTTATTTCAGGATCAGAAGGTTGTTTTTATCCTAACCAGAACCTAACTATTCCCAAGGATATATTCTACCTTGCTCCCAATCAAAGTGAAGTCATATTGTTCTTTGGATGTGACTCAACAAAGCTGCCCAGAGAGCTGCAAGGGAACACAATTGGTTGTTCAGCTGAAAACAAAACGAGTTCGGTTGTGGCAATATACGAGGGTTATAAAAATGCAAGCTTTGTGTCAAAAAATTGCACGGGTAAGGTGGTGAATGTAACGGTGGAAAATGATGTGAAAGGAGGGATTGAAGAGAAGCTGGGTAAAGGGTTCCGGTTGAATTGGATTGCCAGTGACTGTTCCGATTGCAGCAGCAGTGGAGGAAGGTGTGGCTTCGATTCAACTTTATACATTTTCAGATGTTACTGCACCGACAGAGTTCATTCTGCAAAATGTAATACAGCAGTAGCAGCCGGTGGGAAGTCTACAATGACAATAGTTGGCTCGGTGGCTGGAGTTGCATTTGCCTTGCTGATTATCTTAGTTTGTTGGTTTAGGACAAAGATCTTCCCTCCCACATTTCTTTTGTTAAGGAAAGACAGTCCAACACATGAAATTATTGAGAAGTTTTTGAAGGAACATGGACCTCTTCCAGCTGCTAGGTACACTTATTCAGATGTCAAGAAAATAACAAACTCTTTCAAAAACAAATTAGGTCAGGGAGGATACGGAAGTGTATACAAAGGGAAGTTAAATGATCAGCGGATTGTTGCAGTGAAGGTTTTAAGTGAGTCAAAAGGTGATGGTGAAGATTTCATCAATGAAGTTGCAAGTATTAGTAGAACTTCACATGTCAACGTTGTTAGACTTTTGGGGTTCTGTCTGGATGGTTCTAAAAAGGCACTAATATATGAGTTTATGCCAAATGGATCTCTTGAGAAGTTCATATACGAAGAGAAAAATCCATTGAAGGATGATCGCCAATTGGATTGCAAAATATTGTATGATATTGCAGTTGGTGTTGCTCATGGATTGGAGTACTTGCACAGAGGCTGCAACACTAGAATCTTACATTTTGACATAAAACCTCATAATATATTACTTGATGACGATTTCTGCCCTAAAATTTCAGATTTTGGACTTGCTAAAATATGTCCAAGAAAAGAAAGTATTGTATCCATATTTGGCGCAAGGGGAACACCAGGATATATTGCTCCAGAGTTGTTCTCCAGAAATTTTGGTGGGGTGTCACATAAATCAGATGTTTATAGTTATGGAATGATGGTTTTAGAAATGGTTGGCCGAAGAAAGAACATTAAGGTCGAAGTTGATTGTTCTAGTGAGTTATATTTTCCACATTGGATTTACAAGCGTCTTGAATTGAATCAGGATCTTGGACTCAGGTGTGTTAAAAATGAAATTGAGGAAGAAATGGTAAGAAAAATGACAGTGGTGAGTTTATGGTGCATACAAACAGACCCTTCGCATCGACCGGCAATGCATAAAGTGGTGGAAATGCTGGAAGGGAGCCTTCAATTGTTGGAAATACCACCCAAACCATTTTTGTCTTCTCCTTCAATATCACCTAATGATCTATCATCTGAAATATTGGTTAGTAGTGAAGTATTGTCTGGTTTGCCATGTCCAAGGCAACTAAGCAGCTCATACATGAAATTGTATGGAAGCGGATACACATATAACTGTCCGCACTCATTCAGTTGTGGAGCTCGTGGGGTTTTCCGTTACCCTTTCACCAAGGCAGAACAACTAGACTGTGGCTCCATACTCATACATGGCTGTGATGACAGCTATTATTCACCCAAAATGATCCAACTGGAGAAGAATGCAAAAAAAATTGAGCTAACTAGCATCATTGACCAGAATACCATTACAGTTTCTGATCAAGAATTTTACAAGCGTTTGCAAGATAATCTTTGTGATACTTTGAAACAAAACTACACTCTTCCTCCTGCTTCTCCATTTGTTTCTTTTTATATAAATAATAATGTAACTCTTTTCCTATGCAATCGCAGCCATAATATCAATCCTCCAGCACAGTATTTTAAACACAACTGTTCTTCCTTTTCCTACGACATCTATTATAACAGGAAGCCGTATCTCAATGTTACTAATGAGAAGGCAGATAGCTTTTTCTCATCCTGCTCGGTTCTTCAGTTTCCATCTAAAGACTTGACTGATACCAGACACATTTTATCATTTGTTTCTGCTCAAATGTACAATTCTACAGCAGCCATGGTGATTGTTGGAGTTGCAGTGCTGATAATGTTGGGTTACTGCATTAGAACGAAGATCTTCACTCCAGCATTTCCTTTGCTCAGGAAGGAGAATACAACTCATCAAATTATTGAGATGTTTTTGAAGGAACAAGGACCGCTTCTTGCTGCTAGGTACAGTTATTCAGAAGTCAAGAAAATAACCAACTCTTTTAGAGACAAATTAGGTCAGGGAGGATACGGAAGTGTATACAAAGGGAAGTTACGTGATCAGCGGATTATTGCAGTGAAGGTTTTAAGTGGGTCAAAAGGTGATGGCGAAGATTTCATCAATGAAGTTGCAAGTATTAGTAGAACTTCACATGTCAACGTTGTTAGACTTTTGGGGTTTTGTCTGGATGGTTCTAAAAAGGCACTAATATATGAGTTTATGCCAAATGGATCTCTTGAGAAGTTCATATACGAAGAGAAAAATCCATTGAAGGATGATCGCCAATTGGATTGCAAAATATTGTATGATATTGCAGTTGGTGTTGCTCATGGATTGGAGTACTTGCACAGAGGCTGCAACACTAGAATCTTACATTTTGACATAAAACCTCATAATATATTACTTGATGACGATTTCTGCCCTAAAATTTCAGATTTTGGACTTGCTAAAATATGTCCAAGAAAAGAAAGTATTGTATCCATATTTGGCGCAAGGGGAACACCAGGATATATTGCTCCAGAGTTGTTCTCTAGACATTTTGGTGGGGTGTCACATAAATCAGATGTCTACAGCTATGGCATGATGGTTTTAGAAATGGTTGGTCGAAGAAAGAACATTAAGGTTGAAGTTGATTGTTCTAGCGAGTTATATTTTCCACACTGGATTTACAAGCGTCTTGAATTGAATCAGGATCTTGGACTCAAGTGTATTAAAAATGAAATTGATGAAGAAATGGTCAGAAAAATGACAATGGTGAGTTTATGGTACATACAAACTGACCCTTCACATCGACCAGCAATGAATAAAGTGGTGGAAATGTTGGAAGGGAGCCTTCAAATGTTGGAAATACCACCAAAACCCTTTTTATCTTCTCCTTCCACATCTTCACTCCATTTATCATCTGAAACATTGTGA 3669 0.3829 MNRKSLLFTFKPFYCPLFYSYMTLFYLLTTTTLCSIDTKFEACEPKTCGNQSISYPFYIKGLQQPYCGYPGFGLSCDNNIGSPILNLSNTKHIIDQIFYENQSLRVSNNAVISGSEGCFYPNQNLTIPKDIFYLAPNQSEVILFFGCDSTKLPRELQGNTIGCSAENKTSSVVAIYEGYKNASFVSKNCTGKVVNVTVENDVKGGIEEKLGKGFRLNWIASDCSDCSSSGGRCGFDSTLYIFRCYCTDRVHSAKCNTAVAAGGKSTMTIVGSVAGVAFALLIILVCWFRTKIFPPTFLLLRKDSPTHEIIEKFLKEHGPLPAARYTYSDVKKITNSFKNKLGQGGYGSVYKGKLNDQRIVAVKVLSESKGDGEDFINEVASISRTSHVNVVRLLGFCLDGSKKALIYEFMPNGSLEKFIYEEKNPLKDDRQLDCKILYDIAVGVAHGLEYLHRGCNTRILHFDIKPHNILLDDDFCPKISDFGLAKICPRKESIVSIFGARGTPGYIAPELFSRNFGGVSHKSDVYSYGMMVLEMVGRRKNIKVEVDCSSELYFPHWIYKRLELNQDLGLRCVKNEIEEEMVRKMTVVSLWCIQTDPSHRPAMHKVVEMLEGSLQLLEIPPKPFLSSPSISPNDLSSEILVSSEVLSGLPCPRQLSSSYMKLYGSGYTYNCPHSFSCGARGVFRYPFTKAEQLDCGSILIHGCDDSYYSPKMIQLEKNAKKIELTSIIDQNTITVSDQEFYKRLQDNLCDTLKQNYTLPPASPFVSFYINNNVTLFLCNRSHNINPPAQYFKHNCSSFSYDIYYNRKPYLNVTNEKADSFFSSCSVLQFPSKDLTDTRHILSFVSAQMYNSTAAMVIVGVAVLIMLGYCIRTKIFTPAFPLLRKENTTHQIIEMFLKEQGPLLAARYSYSEVKKITNSFRDKLGQGGYGSVYKGKLRDQRIIAVKVLSGSKGDGEDFINEVASISRTSHVNVVRLLGFCLDGSKKALIYEFMPNGSLEKFIYEEKNPLKDDRQLDCKILYDIAVGVAHGLEYLHRGCNTRILHFDIKPHNILLDDDFCPKISDFGLAKICPRKESIVSIFGARGTPGYIAPELFSRHFGGVSHKSDVYSYGMMVLEMVGRRKNIKVEVDCSSELYFPHWIYKRLELNQDLGLKCIKNEIDEEMVRKMTMVSLWYIQTDPSHRPAMNKVVEMLEGSLQMLEIPPKPFLSSPSTSSLHLSSETL* 1223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1045 1222 SMART serkin_6 917 1199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g1045 1222 SMART serkin_6 335 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g1045 1222 Gene3D Phosphorylase Kinase; domain 1 897 991 - -
Mtr7g1045 1222 Gene3D Phosphorylase Kinase; domain 1 314 409 - -
Mtr7g1045 1222 SUPERFAMILY Protein kinase-like (PK-like) 900 1193 IPR011009 -
Mtr7g1045 1222 ProSiteProfiles Protein kinase domain profile. 335 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g1045 1222 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 32 638 - -
Mtr7g1045 1222 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 857 1220 - -
Mtr7g1045 1222 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 667 849 - -
Mtr7g1045 1222 SUPERFAMILY Protein kinase-like (PK-like) 319 611 IPR011009 -
Mtr7g1045 1222 ProSitePatterns Protein kinases ATP-binding region signature. 923 945 IPR017441 GO:0005524
Mtr7g1045 1222 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1041 1053 IPR008271 GO:0004672|GO:0006468
Mtr7g1045 1222 Pfam Wall-associated receptor kinase galacturonan-binding 43 107 IPR025287 GO:0030247
Mtr7g1045 1222 Pfam Protein kinase domain 921 1190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g1045 1222 Pfam Protein kinase domain 338 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g1045 1222 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Mtr7g1045 1222 Pfam Wall-associated receptor kinase C-terminal 168 248 IPR032872 -
Mtr7g1045 1222 Gene3D Transferase(Phosphotransferase) domain 1 410 623 - -
Mtr7g1045 1222 Gene3D Transferase(Phosphotransferase) domain 1 992 1206 - -
Mtr7g1045 1222 PANTHER RUST RESISTANCE KINASE LR10-RELATED 857 1220 IPR045874 GO:0004672
Mtr7g1045 1222 PANTHER RUST RESISTANCE KINASE LR10-RELATED 32 638 IPR045874 GO:0004672
Mtr7g1045 1222 PANTHER RUST RESISTANCE KINASE LR10-RELATED 667 849 IPR045874 GO:0004672
Mtr7g1045 1222 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Mtr7g1045 1222 ProSiteProfiles Protein kinase domain profile. 917 1207 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1045 Mtr-Chr7 22673063 22680946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1045 17 648 Receptor kinase-like Gene Family AT5G38260 39.549 5.35e-135 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr7g1045 Pkinase 1.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1045 - - gmx:100778621 786.178