Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1032 ATGGAAAATGATGCTAATGAAAACTTCTTTAGCACATCCTCATCATCAACACCAACATCTTCTAACTCAAATTCAAATTCAAATTCATCTACCAATCTAGAAACCAAAAATAATCCTCAAAATGGAAATAAAAAATCCAAGAAAAGAGAGAGAAATGAAAATGACACAAAACACCCTACATATAGAGGTGTAAGAATGAGAGCATGGGGAAAATGGGTATCTGAAATTCGTGAGCCAAGAAAGAAGTCAAGAATATGGCTTGGAACATACCCTACAGCTGAAATGGCAGCTAGAGCTCATGATGTAGCTGCTTTAGCCATAAAGGGTCATTCAGCTTACCTCAATTTCCCTAATTTGGCTCAAAATCTTCCGAGGCCTTCGACTACATCACCTAAGGACATTCAAGTTGCAGCTGCAAAAGCAGCAGCCATTGTATTTGAGGAGATTAAGGAAGATCAAGATCAAGATCAAGATCAAGTTTCATTTTCAACTCTTTCTTCCATTGATAATGTTCAAGAGTCTAATTCAAGTTCTCCATCTACAACTGCTACTACAAATGATGATATTGATGACACACTCTTTGATCTTCCAGATCTTTTTCCTGATGGAAAAAATGGAATTCTTTCTTATTATTCTTCTTGGCATTTATGTGCTGTTGATAGTGGACTTCGCCTCGAGGAGCAACTTTCGTCATGGGAGTATTACTAG 708 0.3715 MENDANENFFSTSSSSTPTSSNSNSNSNSSTNLETKNNPQNGNKKSKKRERNENDTKHPTYRGVRMRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHSAYLNFPNLAQNLPRPSTTSPKDIQVAAAKAAAIVFEEIKEDQDQDQDQVSFSTLSSIDNVQESNSSSPSTTATTNDDIDDTLFDLPDLFPDGKNGILSYYSSWHLCAVDSGLRLEEQLSSWEYY* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1032 235 MobiDBLite consensus disorder prediction 1 40 - -
Mtr7g1032 235 Gene3D AP2/ERF domain 60 118 IPR036955 GO:0003700|GO:0006355
Mtr7g1032 235 MobiDBLite consensus disorder prediction 1 62 - -
Mtr7g1032 235 PRINTS Ethylene responsive element binding protein signature 61 72 IPR001471 GO:0003700|GO:0006355
Mtr7g1032 235 PRINTS Ethylene responsive element binding protein signature 83 99 IPR001471 GO:0003700|GO:0006355
Mtr7g1032 235 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 10 235 - -
Mtr7g1032 235 MobiDBLite consensus disorder prediction 167 188 - -
Mtr7g1032 235 CDD AP2 61 119 IPR001471 GO:0003700|GO:0006355
Mtr7g1032 235 Pfam AP2 domain 59 110 IPR001471 GO:0003700|GO:0006355
Mtr7g1032 235 ProSiteProfiles AP2/ERF domain profile. 60 117 IPR001471 GO:0003700|GO:0006355
Mtr7g1032 235 PANTHER ETHYLENE RESPONSE FACTOR 10 235 - -
Mtr7g1032 235 SUPERFAMILY DNA-binding domain 60 118 IPR016177 GO:0003677
Mtr7g1032 235 MobiDBLite consensus disorder prediction 41 62 - -
Mtr7g1032 235 SMART rav1_2 60 123 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1032 Mtr-Chr7 22302911 22304488 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1032 47 227 AP2-EREBP Transcription Factor Family AT2G44940 54.902 9.53e-66 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mtr7g1032 AP2 2.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1032 - - gmx:100792964 241.891