Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1028 ATGCTATTCCTATTTTCAAACCTTCAGTCCATGAAGTTGTTACCCTTTTGGCTTTTTCTTTTGACTTATTTTTGTGCATTCACAACAGCTACTTCAACTACTTCATCAAGAACAATACAAAATAGTGAAGCAAATAATTTGTTGATGTGGAAAGCAAGCCTTGACAATCAAAGCCAAGCTTTGTTATCTTCATGGAGTGGCAATAATTCATGCAACTGGTTTGGAATTTCTTGTAAAGAAGATTCCATTTCTGTCTCTAAGGTAAATCTCACAAATATGGGATTGAAAGGTACGCTTGAAAGTCTTAACTTCTCATCACTTCCAAATATCCAAACCCTAAACATAAGTCACAATTCCTTAAATGGAAGTATTTCTCACCATATTGGAATGTTGTCCAAACTTACTCATCTTGATCTTAGTTTCAATCTTTTCTCAGGAACAATTCCATATGAAATAACACATTTGATTAGTCTTCAAACTATATATTTGGATAATAATGTTTTCAGTGGTTCCATTCCTGAAGAAATAGGTGAATTAAGAAATCTGAGAGAACTTGGTATCTCATATGCAAATCTCACAGGGACTATCCCAACTTCCATTGGGAATCTGACCTTGTTGTCATATTTGTATTTAGGAGGAAACAACCTTTATGGTAACATTCCAAAAGAACTTTGGAATTTGAACAACTTAACCTTCTTAAGAGTTGAATTAAATAAATTCAATGGGTCTGTTTTAGCTCAAGAAATTGTGAAGTTGCATAAGATAGAGACTCTTGATCTTGGTGGTAATAGTCTTTCCATTAATGGTCCTATCCTCCAAGAAATTTTGAAGTTGGGAAATTTAAAATACCTTTCTTTTTTTCGATGCAATGTCAGAGGGTCTATTCCATTTTCTATAGGAAAGTTGGCCAACTTGTCATATTTAAATTTAGCACACAACCCTATTTCTGGCCACCTTCCTATGGAAATTGGAAAGTTAAGGAAGCTAGAATATCTATATATTTTTGACAATAACTTATCTGGTAGTATTCCTGTGGAAATTGGGGAGTTGGTGAAAATGAAAGAGTTAAAGTTTAATAACAATAATCTTTCTGGTTCGATTCCTCGTGAAATTGGAATGTTGAGAAATGTTGTTCAAATGGATTTGAACAATAACTCTCTCTCAGGTGAAATCCCGCCGACAATTGGAAACTTAAGTAATATACAACAACTTTCATTTTCTCTGAACAATCTCAATGGGAAACTACCAATGGGAATGAATATGCTTTTGAGTTTGGAAAATCTGCAAATATTTGATAATGACTTCATTGGTCAGCTGCCTCATAACATTTGCATTGGTGGGAATTTGAAATTTTTGGGTGCTCTAAATAACCACTTCACCGGCCGAGTTCCTAAGAGTTTGAAGAATTGCTCTAGCATTATAAGACTTAGACTTGACCAAAACCAACTTACTGGAAATATAACACAAGATTTTAGTGTTTATCCAAATTTGAATTACATAGACTTAAGTGAAAACAATTTTTACGGACACCTTTCATCGAATTGGGGAAAGTGTCAAAACCTAACAAGCTTCATAATTTCCCATAATAATATATCAGGTCATATACCACCAGAAATAGGAAGGGCACCCAATTTGGGTATACTTGACTTATCTTCAAACCATCTCACAGGGAAAATTCCGAAGGAGTTAAGCAACTTGTCTTTGTCCAAACTTTTGATAAGCAACAACCATCTCTCCGGAAACATTCCTGTCGAAATATCATCCTTAGATGAGCTTGAGATCTTAGACCTTGCAGAAAATGATCTAAGTGGCTTCATCACAAAACAACTTGCAAATTTGCCTAAGGTATGGAACTTAAATTTGAGCCATAACAAATTGATAGGAAATATTCCTGTTGAATTGGGACAATTTAAAATCCTTCAAAGCCTTGATCTGAGTGGAAATTTTTTAAATGGAACAATACCATCAATGCTTACACAGTTGAAATACTTGGAAACATTGAATATCTCACATAATAATCTTTCTGGCTTTATTCCCTCTAGCTTTGATCAAATGTTAAGCTTGACATCTGTTGATATATCATATAACCAATTGGAGGGTCCACTCCCCAACATTCGAGCTTTCAGAAACGCTACAATCGAAGTGTTGAGAAATAATAAAGACTTGTGTGGTAATGTCTCTGGCTTAGAGCCCTGCCCGACATCAAGCATTGAATCTCATCATCATCATCATACTAACAAAATCTTATTGATAGTTTTGCCCCTTATAGCTGTTGGAACTCTAATGTTAATATTATTTTGTTTCAAATACTCATATAATCTCTTCCAAACATCAAACACCAACGAAAACCAGGCTGGAGAGAACATCATTGTACCAGAAAATGTATTTACAATATGGAACTTTGATGGAAAAATTGTGTTTGAAAACATTGTGGAAGCCACAGAAGATTTTGATGAGAAACATCTAATTGGTGTTGGGGGGCATGGAAGTGTCTACAAAGCAAAGTTGCACACGGGCCAAGTAGTTGCTGTGAAAAAGCTCCATTCAGTGGCAAATGGTGAAAATCCCAATCTAAAATCTTTCACAAATGAAATCCAAGCTCTAACCGAAATTAGACATCGTAATATTGTGAAGTTGCATGGATTTTGCTCACATTCTCAGTTTTCATTTTTGGTTTATGAGTTCGTAGAGAAAGGTAGTTTGGAGAAAATTTTGAAGGATGATGAAGAAGCAATTGCGTTTGATTGGAACAAGAGAGTGAATGTCCTTAAAGATGTAGCTAATGCTTTATGCTACATGCATCATGATTGCTCGCCTCCAATTGTTCACAGAGATATATCAAGCAAGAATATTCTTCTGGATTTAGAATATGTGGCTCGTGTCTCGGACTTTGGAACAGCTAAGCTTCTTGATCTTAATTTAACTAGCTCAACCTCATTTGCATGCACATTTGGATATGCTGCTCCAGAACTTGCATACACAACAAAAGTGAATGAGAAGTGTGATGTGTATAGTTTCGGGGTATTAGCATTGGAAACACTTTTTGGAAAACATCCCGGAGATGTTATATCTTTATGGAGCACCATTGGATCTACACCTGATATTATGCCATTGTTGGACAAACGTCTCCCGCATCCTTCGAATCCCATTGCTGAGGAGTTAGTGTCGATTGCAATGATAGCTTTTACATGTTTGACTGAAAGTCCTCAATCTCGCCCTGCCATGGATCTGGTTTCAAAGGAGCTAGCAGGTTTCCAAGGAGCTTGTAATGTCAAAATGGTTTCACACAAAAAGCAAAAAGATCCTACTTATTGA 3315 0.3572 MLFLFSNLQSMKLLPFWLFLLTYFCAFTTATSTTSSRTIQNSEANNLLMWKASLDNQSQALLSSWSGNNSCNWFGISCKEDSISVSKVNLTNMGLKGTLESLNFSSLPNIQTLNISHNSLNGSISHHIGMLSKLTHLDLSFNLFSGTIPYEITHLISLQTIYLDNNVFSGSIPEEIGELRNLRELGISYANLTGTIPTSIGNLTLLSYLYLGGNNLYGNIPKELWNLNNLTFLRVELNKFNGSVLAQEIVKLHKIETLDLGGNSLSINGPILQEILKLGNLKYLSFFRCNVRGSIPFSIGKLANLSYLNLAHNPISGHLPMEIGKLRKLEYLYIFDNNLSGSIPVEIGELVKMKELKFNNNNLSGSIPREIGMLRNVVQMDLNNNSLSGEIPPTIGNLSNIQQLSFSLNNLNGKLPMGMNMLLSLENLQIFDNDFIGQLPHNICIGGNLKFLGALNNHFTGRVPKSLKNCSSIIRLRLDQNQLTGNITQDFSVYPNLNYIDLSENNFYGHLSSNWGKCQNLTSFIISHNNISGHIPPEIGRAPNLGILDLSSNHLTGKIPKELSNLSLSKLLISNNHLSGNIPVEISSLDELEILDLAENDLSGFITKQLANLPKVWNLNLSHNKLIGNIPVELGQFKILQSLDLSGNFLNGTIPSMLTQLKYLETLNISHNNLSGFIPSSFDQMLSLTSVDISYNQLEGPLPNIRAFRNATIEVLRNNKDLCGNVSGLEPCPTSSIESHHHHHTNKILLIVLPLIAVGTLMLILFCFKYSYNLFQTSNTNENQAGENIIVPENVFTIWNFDGKIVFENIVEATEDFDEKHLIGVGGHGSVYKAKLHTGQVVAVKKLHSVANGENPNLKSFTNEIQALTEIRHRNIVKLHGFCSHSQFSFLVYEFVEKGSLEKILKDDEEAIAFDWNKRVNVLKDVANALCYMHHDCSPPIVHRDISSKNILLDLEYVARVSDFGTAKLLDLNLTSSTSFACTFGYAAPELAYTTKVNEKCDVYSFGVLALETLFGKHPGDVISLWSTIGSTPDIMPLLDKRLPHPSNPIAEELVSIAMIAFTCLTESPQSRPAMDLVSKELAGFQGACNVKMVSHKKQKDPTY* 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1028 1104 Gene3D Ribonuclease Inhibitor 420 741 IPR032675 -
Mtr7g1028 1104 SUPERFAMILY L domain-like 466 724 - -
Mtr7g1028 1104 SUPERFAMILY L domain-like 79 345 - -
Mtr7g1028 1104 ProSitePatterns Protein kinases ATP-binding region signature. 823 846 IPR017441 GO:0005524
Mtr7g1028 1104 Pfam Leucine rich repeat 640 698 IPR001611 GO:0005515
Mtr7g1028 1104 Gene3D Phosphorylase Kinase; domain 1 778 895 - -
Mtr7g1028 1104 Pfam Leucine rich repeat N-terminal domain 41 78 IPR013210 -
Mtr7g1028 1104 ProSiteProfiles Protein kinase domain profile. 817 1085 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g1028 1104 Gene3D Ribonuclease Inhibitor 190 250 IPR032675 -
Mtr7g1028 1104 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 9 184 - -
Mtr7g1028 1104 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 184 278 - -
Mtr7g1028 1104 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 277 1085 - -
Mtr7g1028 1104 Gene3D Transferase(Phosphotransferase) domain 1 896 1102 - -
Mtr7g1028 1104 SUPERFAMILY L domain-like 272 565 - -
Mtr7g1028 1104 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 277 1085 - -
Mtr7g1028 1104 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 184 278 - -
Mtr7g1028 1104 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 9 184 - -
Mtr7g1028 1104 SMART LRR_typ_2 131 154 IPR003591 -
Mtr7g1028 1104 SMART LRR_typ_2 613 637 IPR003591 -
Mtr7g1028 1104 SMART LRR_typ_2 374 398 IPR003591 -
Mtr7g1028 1104 SMART LRR_typ_2 543 566 IPR003591 -
Mtr7g1028 1104 SMART LRR_typ_2 155 179 IPR003591 -
Mtr7g1028 1104 SMART LRR_typ_2 302 326 IPR003591 -
Mtr7g1028 1104 SMART LRR_typ_2 589 612 IPR003591 -
Mtr7g1028 1104 SMART LRR_typ_2 661 684 IPR003591 -
Mtr7g1028 1104 SMART LRR_typ_2 203 227 IPR003591 -
Mtr7g1028 1104 Gene3D Ribonuclease Inhibitor 39 189 IPR032675 -
Mtr7g1028 1104 Gene3D Ribonuclease Inhibitor 251 419 IPR032675 -
Mtr7g1028 1104 SUPERFAMILY Protein kinase-like (PK-like) 804 1080 IPR011009 -
Mtr7g1028 1104 Pfam Protein kinase domain 818 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr7g1028 1104 ProSiteProfiles Leucine-rich repeat profile. 544 567 IPR001611 GO:0005515
Mtr7g1028 1104 ProSitePatterns Tyrosine protein kinases specific active-site signature. 941 953 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1028 Mtr-Chr7 22046784 22050355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1028 25 989 Receptor kinase-like Gene Family AT4G08850 42.610 0.0 714
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr7g1028 Pkinase 3.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1028 - - mtr:MTR_7g045710 2090.46