Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1010 ATGGACTTTGGAGGGAACATGTTCTGTCTAAACAACAGAGACCAAAGTAATACTAACAATAACGGTAACAGTAACGGTTTTACTTGGTGTAGTAGTGGTAGTACTACTACTGGTACTGCATGGAACATGAATACTTTCAATGTTAATGAGGTAAACAATTCAGTCTCCGCCGCCAACCGTACTGAGGCAGGTCTAGCTAACGCGCTTATGTACCTGCCTCAAAATGAAGGCGGCGGACGACAGTATCAAAGTGCATACGGTGGAGGTGTGTCTCGGGGTCATATGATGCCTGATCCACACCTCACGTGTTTGAAGTTGGGGAAGAGGCATTATTTTGAGGATGTGAGTGGTGGTGGTGGGGTGATGGGGGAGAAGAAAGGGAAAGGAGGGTATTGTGGTGGTGGGAAGACGGCGGCGGTGGGAGGTTATACGGCGGTGACAAGGTGTCAGGTGGATGGGTGTAACGTGGCATTGATGAATGCTAAGGAGTATCATAGGAGACATAAGGTTTGTGAGATGCATTCAAAGGCACCAAAAGTTGTGGTGTTGGGTTTGGAGCAAAGATTCTGTCAACAGTGTAGCAGGTTCCATGTTGTATCAGAATTTGATGATTCAAAAAGAAGTTGTAGAAGGAGACTGGCAGGGCACAATGAGAGAAGAAGAAAGAGCTCCCATGATTCTGTTGGGAGGAATTCCTCACAAGGTGGGTGTGCTCTCTCTCTTCTGTCATCTCGGACTGATTCATGGCTTTCACCGGCTGACCTCTCCGTAAGATGCAGTGCTGCATTAAGCGAATTGATAGCAGAAAACCGAGCATCGATAATGGCTAGGCAATATGTCTCAGACAGAGACTGGCATTTGCAGCACCATGCCGTGGAAGACTACAAAGAGATCCAATCCGAGTCCAATTATTTCCCACAACATATGTTTCCGCAGACACATTAG 945 0.4688 MDFGGNMFCLNNRDQSNTNNNGNSNGFTWCSSGSTTTGTAWNMNTFNVNEVNNSVSAANRTEAGLANALMYLPQNEGGGRQYQSAYGGGVSRGHMMPDPHLTCLKLGKRHYFEDVSGGGGVMGEKKGKGGYCGGGKTAAVGGYTAVTRCQVDGCNVALMNAKEYHRRHKVCEMHSKAPKVVVLGLEQRFCQQCSRFHVVSEFDDSKRSCRRRLAGHNERRRKSSHDSVGRNSSQGGCALSLLSSRTDSWLSPADLSVRCSAALSELIAENRASIMARQYVSDRDWHLQHHAVEDYKEIQSESNYFPQHMFPQTH* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1010 314 Pfam SBP domain 149 222 IPR004333 GO:0003677
Mtr7g1010 314 ProSiteProfiles Zinc finger SBP-type profile. 146 223 IPR004333 GO:0003677
Mtr7g1010 314 SUPERFAMILY SBT domain 147 228 IPR036893 GO:0003677|GO:0005634
Mtr7g1010 314 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 26 314 - -
Mtr7g1010 314 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 26 314 IPR044817 GO:0003677
Mtr7g1010 314 MobiDBLite consensus disorder prediction 213 233 - -
Mtr7g1010 314 Gene3D - 140 210 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1010 Mtr-Chr7 21568202 21572630 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g1010 103 222 SBP-box Gene Family AT1G27370 54.839 3.73e-39 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mtr7g1010 SBP 2.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1010 - - cam:101496293 421.394