Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0989 ATGAGTCAGTGTGTTCCTAGTTGGGATGTTGATGAAAATCCACAACCACCTCCAAGATCAGTCTCTCTTCGTTCCAACTCTAATTCAACTAATCCTCATGATGTTCCCATGTTAGACTATGATGTTGCAGAATTGACATGGGAAAATGGACAGATTTCTATGCATGGCTTAGGGTTACCGAAAGTGCCGCATAAACATCCATCAACCGCAGGTACAACACCTTCCAAGGAAACATGGGAAAAGCCTCGTGGTAGTGGTACCTTGGAGTCTATAGTGAACCAAGCCACAAGCTTTCCGCACCGCGGAAAATCACCCTTTCTCGCCGGTGGTGGTGTTTATGGAAACATGTTAGTCCCATGGCTTGACCCACAACGAGCGGCAGCCATCGCAGCCGCCACAGCCGCCTCCAACGGCATGGCTGTGGATGCGTTGGTTCCCTGCTCCAATACTACTAAGGAGCAGAGAACCCATGCAATGGATCCAGTCCCTAGATCAGGGATTGGATCATGCATGGTTGGCGGCCATACACCCGTGGGATCCTGCAGTGCTGTCGTGGCCGCAACGCAAGACGAAGGAGGTATCCTTGCTGCGTCAGCGGCAAAGCGTGGGAGGGTGGCACACGTGGCGGGGAGCGGTAGGGACCAAAGTATGAGTGGCAGTGCAACCTTTGGGAGGCAGAGCCAGCAAGTGACACTTGATACGTACGATAGGGAATTTGGTATGACTGGTTTCACTTCAACTTCAATAGCTTCTATGGATAACACCAGCTCTGAGAAGCAGTGCACCAGGACCACCACCATAGACGACCATGATTCTGTTTGTCACAGTAGACCACCGAGGGAAGAAGCTGACGTGGATGAGAAAAAGAGAGAAAATAGAAAATCATCAGTCTCCACAAAAAGGAGTAGAGCTGCAGCTATACACAACCAATCTGAAAGGAAAAGGAGGGATAAGATAAACCAGAGAATGAAGACATTGCAAAAGTTGGTCCCAAATTCCAGCAAGACCGATAAAGCTTCAATGTTGGATGAGGTGATAGAATATCTGAAACAATTGCAAGCACAAGTGAATATGGTGAATAGATTCAACATGTCATCGATGATGATGCCGATGACAATGCAACAACAACTTCAAATGTCAATGATGAATCCAATGGGCATGGGAATGGGGCCGATGGGAATGCCCGGGATGGGCATGGGTATGGGAATGGGCATGGGAATGGATATGAACACCATGAATCGCGCTAACATACCTGGAATGCCGCCCGTACTCCACCCTTCTGCATTCATGCCTATGCCTTCGTGGGATGCCGGCGGTGGTGACCGACTTCAAGGCCCTCCAGCAGCCGGGATGGCTGACCCCCTCTCCACATTTTTTGGTTGCCAATCACAGCCTATGACCATGGATGCTTATAGTAGGATTGCTGCCATGTATCAACAGATGCAACAACAACCTCCAGCACCAGGTTCAAAGAATTGA 1479 0.4936 MSQCVPSWDVDENPQPPPRSVSLRSNSNSTNPHDVPMLDYDVAELTWENGQISMHGLGLPKVPHKHPSTAGTTPSKETWEKPRGSGTLESIVNQATSFPHRGKSPFLAGGGVYGNMLVPWLDPQRAAAIAAATAASNGMAVDALVPCSNTTKEQRTHAMDPVPRSGIGSCMVGGHTPVGSCSAVVAATQDEGGILAASAAKRGRVAHVAGSGRDQSMSGSATFGRQSQQVTLDTYDREFGMTGFTSTSIASMDNTSSEKQCTRTTTIDDHDSVCHSRPPREEADVDEKKRENRKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVNMVNRFNMSSMMMPMTMQQQLQMSMMNPMGMGMGPMGMPGMGMGMGMGMGMDMNTMNRANIPGMPPVLHPSAFMPMPSWDAGGGDRLQGPPAAGMADPLSTFFGCQSQPMTMDAYSRIAAMYQQMQQQPPAPGSKN* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0989 492 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 1 491 IPR031066 -
Mtr7g0989 492 CDD bHLH_AtPIF_like 303 358 - -
Mtr7g0989 492 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 303 352 IPR011598 GO:0046983
Mtr7g0989 492 MobiDBLite consensus disorder prediction 58 83 - -
Mtr7g0989 492 PANTHER TRANSCRIPTION FACTOR UNE10 1 491 - -
Mtr7g0989 492 MobiDBLite consensus disorder prediction 18 34 - -
Mtr7g0989 492 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 301 366 IPR036638 GO:0046983
Mtr7g0989 492 MobiDBLite consensus disorder prediction 1 36 - -
Mtr7g0989 492 SMART finulus 309 358 IPR011598 GO:0046983
Mtr7g0989 492 Coils Coil 309 329 - -
Mtr7g0989 492 MobiDBLite consensus disorder prediction 248 262 - -
Mtr7g0989 492 Pfam Helix-loop-helix DNA-binding domain 308 353 IPR011598 GO:0046983
Mtr7g0989 492 Gene3D - 298 363 IPR036638 GO:0046983
Mtr7g0989 492 MobiDBLite consensus disorder prediction 263 298 - -
Mtr7g0989 492 MobiDBLite consensus disorder prediction 248 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0989 Mtr-Chr7 21122606 21129735 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0989 1 472 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 45.000 1.03e-95 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mtr7g0989 HLH 7.7e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0989 - - mtr:MTR_7g039110 672.93