Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0986 ATGTCAAGATCTGAATTAGGGAATGATGACCATCAACAATCGCTACCTCAACAACCAACAATAACCCCTGCCAGTGTCGATAAGGACCAATCGCCGGTGGCTGATATGCCATTTTCTCCAGCCCCTCCCTTTGAGGACCAAAAACAGCCACTACCACAACAGCCAACCATCATTGCTACCACCATCAATAATGGTGAATCACATGTAGCAACGATGATGACCGTTGTGCCATCTTCTTCAGCCCCTCCCTTATCTTCTGTCTCAGCTGATATCTCCAAAAAGCGTAGAGGCAGGCCTCTTGGTTCTCGCAACCAAATCCAATCTAAAAAAAGGGCTTATGGACCGGTGATCCCTGCAAAGGCCCACATTATGATGGTGAATGTTGAAGAGAATGTGTTAGAAAAGATTATGACATTTTCCAAGAATCTCTCTGGAAATATAAGCGTATTATCGGCAGTTGGGACCGCATCCAAAGCAACTATTTGTATAGCTGGTAAAACAGAGACTTATGAGGGAAAATTTGAGATTATATCACTTGGTGGGTCTTTGTTTCCTGATCAAAAAGAAAGCCATTGCAAGGTACTTGAGGGCTTAAATGTGAGTTTATCATCGGATGGTAATATATTTGGTGGTAAAGTTGTTGATATTTTGATCGCTGCTTCTCCTGTTCAGATAGTATTAGGGAGTTATCCTGCAGGGAGTCGAGAGGAAGTCAAGTCTGATCCAGAAGAGCCTCCTAAAGAAGACTCAAGTCAACCATCAGATGAGAGTCAAGTGAAAGTCGAGTCTGGCCCAAAAGTGCCTCCTAAAGAAGACTCAAGTCAACCATCAGCTAAGAGTCAAGAAAAAGTCGAGTCTGATCCAAAAGAGCATTCTGAAGAAGACCCAAATCCACCATTGGAGTCCACTCTTAATAATTCATCTTCAGATGGGCTTAATGTCCTAGTTTAG 951 0.4301 MSRSELGNDDHQQSLPQQPTITPASVDKDQSPVADMPFSPAPPFEDQKQPLPQQPTIIATTINNGESHVATMMTVVPSSSAPPLSSVSADISKKRRGRPLGSRNQIQSKKRAYGPVIPAKAHIMMVNVEENVLEKIMTFSKNLSGNISVLSAVGTASKATICIAGKTETYEGKFEIISLGGSLFPDQKESHCKVLEGLNVSLSSDGNIFGGKVVDILIAASPVQIVLGSYPAGSREEVKSDPEEPPKEDSSQPSDESQVKVESGPKVPPKEDSSQPSAKSQEKVESDPKEHSEEDPNPPLESTLNNSSSDGLNVLV* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0986 316 Pfam Plants and Prokaryotes Conserved (PCC) domain 121 230 IPR005175 -
Mtr7g0986 316 MobiDBLite consensus disorder prediction 7 27 - -
Mtr7g0986 316 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 69 278 IPR039605 GO:0003680
Mtr7g0986 316 SUPERFAMILY AF0104/ALDC/Ptd012-like 120 237 - -
Mtr7g0986 316 Gene3D - 119 244 - -
Mtr7g0986 316 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 10 69 278 - -
Mtr7g0986 316 MobiDBLite consensus disorder prediction 1 51 - -
Mtr7g0986 316 ProSiteProfiles PPC domain profile profile. 116 252 IPR005175 -
Mtr7g0986 316 MobiDBLite consensus disorder prediction 298 316 - -
Mtr7g0986 316 MobiDBLite consensus disorder prediction 236 255 - -
Mtr7g0986 316 CDD DUF296 122 230 IPR005175 -
Mtr7g0986 316 MobiDBLite consensus disorder prediction 77 108 - -
Mtr7g0986 316 MobiDBLite consensus disorder prediction 276 297 - -
Mtr7g0986 316 MobiDBLite consensus disorder prediction 233 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0986 Mtr-Chr7 21080813 21083800 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0986 86 236 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 43.949 3.21e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0986 - - mtr:MTR_3g116100 436.802