Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0973 ATGAATTTACACAACCTAGTGGCGTTCATCAATCGGTTTCATCCTTTTATGGATAAATACAAGTGCAAACTTTGCTATAGAAGCTTTAACAATGGAAGAGCATTGGGGGGTCACATGAGATCTCATATGATGAACCTTCTTGTTACAAAGCAAGAAGAAGAATCATCGCGAACGGTTCAACTTAGTTTTGAAGCTGAGTCAGCACCGTCTTCATCATCGTCATCAGAAGATGATGACGTTGATGAAAAGGGTCTTAATTATGGTCTCAGAGAGAATCCAAAGAGAAGCATTCGTCTCGTAGATCAAGAGTTTTCTTTTCCACAAGTGGATACAAGTTCTGTGATTCTTCAAGATATAGAAAGCGAAACTGAATCATCGAAGAATAATCCAACTCGGAAAAGATCCAAAAGGGTGTGGAAAATTCGCGGGTTTGATCAAAAGTATTACAATGAATCTGCTACGAAGAAAATGAAATTTTTTAACAAGAATGATTCTTCGGTTGTTGAACATGAACCTGTTAGTTCGGTTTCTGATGCAACAACCGAAGAAGATGTTGCATTTTGTCTAATGCAGTTGTCGAGAGACAAATGGAATAGACAAAATGAACAATATGAAGACGTGGAAGATGAAGATGACGATGACGAAGCTGAAGAGGAAGAAGAAGAAGAAGATGAAATTGAAATCGAAAGATCTTTGGAAGATAGTGATGAATCTCAAGAGCTACTAAAAGTATGCAAGAATAATAATAAAGTACGTAAAGGAAGGTACAAATGTGAAACATGTAATAAAGTGTTCAAATCGTATCAAGCATTGGGTGGTCATAGAGCAAGTCACAAGAAGATTAAACCGAACATAACGGTGGAAGAATCGTCACCAGAATTCGAAATTGTTGAAAAGAAAGTTCATGAATGTCCGGTATGTTTTCGAGTATTTAATTCGGGTCAAGCACTTGGTGGACACAAAAGAACACATGTGATTCATGGATCATCATCAACAACAGTTCCAATTTTCAGCTCAAAAAGAGTTACAAAAAGTGTTATAGATCTTAACCTTCCTGCTCCAATTGATGATGATGAAGTTAGTCAAATTGAAAATTCTGCTGTTTCTGATGCAGAATTTCTCAAAACTCGTTAA 1134 0.366 MNLHNLVAFINRFHPFMDKYKCKLCYRSFNNGRALGGHMRSHMMNLLVTKQEEESSRTVQLSFEAESAPSSSSSSEDDDVDEKGLNYGLRENPKRSIRLVDQEFSFPQVDTSSVILQDIESETESSKNNPTRKRSKRVWKIRGFDQKYYNESATKKMKFFNKNDSSVVEHEPVSSVSDATTEEDVAFCLMQLSRDKWNRQNEQYEDVEDEDDDDEAEEEEEEEDEIEIERSLEDSDESQELLKVCKNNNKVRKGRYKCETCNKVFKSYQALGGHRASHKKIKPNITVEESSPEFEIVEKKVHECPVCFRVFNSGQALGGHKRTHVIHGSSSTTVPIFSSKRVTKSVIDLNLPAPIDDDEVSQIENSAVSDAEFLKTR* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0973 377 ProSiteProfiles Zinc finger C2H2 type domain profile. 302 324 IPR013087 -
Mtr7g0973 377 MobiDBLite consensus disorder prediction 204 234 - -
Mtr7g0973 377 Pfam C2H2-type zinc finger 301 324 - -
Mtr7g0973 377 Pfam C2H2-type zinc finger 20 43 - -
Mtr7g0973 377 Pfam C2H2-type zinc finger 255 280 - -
Mtr7g0973 377 Gene3D Classic Zinc Finger 4 82 - -
Mtr7g0973 377 ProSiteProfiles Zinc finger C2H2 type domain profile. 256 283 IPR013087 -
Mtr7g0973 377 MobiDBLite consensus disorder prediction 199 235 - -
Mtr7g0973 377 MobiDBLite consensus disorder prediction 63 87 - -
Mtr7g0973 377 ProSitePatterns Zinc finger C2H2 type domain signature. 304 324 IPR013087 -
Mtr7g0973 377 SUPERFAMILY beta-beta-alpha zinc fingers 255 324 IPR036236 -
Mtr7g0973 377 Coils Coil 204 224 - -
Mtr7g0973 377 ProSitePatterns Zinc finger C2H2 type domain signature. 258 278 IPR013087 -
Mtr7g0973 377 SUPERFAMILY beta-beta-alpha zinc fingers 19 44 IPR036236 -
Mtr7g0973 377 ProSitePatterns Zinc finger C2H2 type domain signature. 22 42 IPR013087 -
Mtr7g0973 377 PANTHER ZINC FINGER PROTEIN ZAT1-RELATED 17 375 IPR044303 GO:0006355
Mtr7g0973 377 PANTHER CYS2/HIS2 ZINC-FINGER TRANSCRIPTION FACTOR 17 375 - -
Mtr7g0973 377 ProSiteProfiles Zinc finger C2H2 type domain profile. 20 42 IPR013087 -
Mtr7g0973 377 Gene3D Classic Zinc Finger 253 324 - -
Mtr7g0973 377 SMART c2h2final6 302 324 IPR013087 -
Mtr7g0973 377 SMART c2h2final6 20 42 IPR013087 -
Mtr7g0973 377 SMART c2h2final6 256 278 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0973 Mtr-Chr7 20746676 20749210 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0973 17 363 C2H2 Transcription Factor Family AT3G60580 42.857 3.97e-72 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr7g0973 zf-C2H2_6 5.9e-12 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0973 - - cam:101509915 467.233