Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0948 ATGTTTATGTGTTCTTCACCAAATGTTGTTCCACGTTGGCTTCAAGTTATGCTGACTGAGAAATTCTACAACGCTTGTTTAATTCATCAAGAAGAAAAAAAGAATGAAAAAAATATTTATTGTTTGGATTGTTCCATCAGTCTTTGTCCTCACTGTGTTTCTCCTCATGCCTCTCACAGACTCTTGCAGATAAGAAGATATGTTTATCATGATATTATAAGGATGGATGATGCTGCAAAGTTAATTGACTGTTCTTCTATTCAATTCTACAGAACAAACGGTGCAAAAGTGATTTTCATAAATCAAAGACCAATTCCAAAGAAATGCTCTTCAAGCAATATCTGCAGAACCTGTACCAGAAGTCTTCAAGATCCTTACAAATTCTGCTCTCTTTCTTGCAAGGTGAGTCACTTGGTGAAAACATTTGGTTCACTATCTGGTTACTTAGTCGAGTGCAACACCATGCCACCATTATCTGATTCTGGACTAGACGACAGTCTAATGACACCTGACTCGGTTCTCGAACCATCCGGTTCAAACCGAACTTCATCCGGTTCGGGTGGATACATTGGCATTGATTGCAAAACCGCCCTTGCTTGCACCGCTACTACCGAGGTTGTCCGAAAGAAGAGAACCGGTGTCATCACTTTCCGACCATCGTGTCGGCCTGCATGCTCGCCGGTATCGGAAATCTCGGGGAGTCTGATGAATAGGAGGAAAGGAACGCCACATAGAGCCCCGTTACATTGA 750 0.42 MFMCSSPNVVPRWLQVMLTEKFYNACLIHQEEKKNEKNIYCLDCSISLCPHCVSPHASHRLLQIRRYVYHDIIRMDDAAKLIDCSSIQFYRTNGAKVIFINQRPIPKKCSSSNICRTCTRSLQDPYKFCSLSCKVSHLVKTFGSLSGYLVECNTMPPLSDSGLDDSLMTPDSVLEPSGSNRTSSGSGGYIGIDCKTALACTATTEVVRKKRTGVITFRPSCRPACSPVSEISGSLMNRRKGTPHRAPLH* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0948 249 ProSiteProfiles Zinc finger B-box type profile. 21 64 IPR000315 GO:0008270
Mtr7g0948 249 PANTHER OS03G0225400 PROTEIN 11 248 - -
Mtr7g0948 249 MobiDBLite consensus disorder prediction 165 184 - -
Mtr7g0948 249 SUPERFAMILY B-box zinc-binding domain 24 67 - -
Mtr7g0948 249 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 11 248 - -
Mtr7g0948 249 Pfam PLATZ transcription factor 65 135 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0948 Mtr-Chr7 19408432 19411072 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Mtr7g0948 PLATZ 6.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0948 - - mtr:MTR_2g055210 509.605