Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0932 ATGGTGCAAAGGGTCAACTCCTTAGTGCCACAAAGGACCAATAATATAAGCATAGGTGCTGTGCTTGATTTGGGTTCATTAATGGGAAAGCACCAGAAGATAGCAATAGAAATTGCAGTGCATGAGTTCAATAACCAAACGAGTTCTTCTTCTAAGCTGGATTTGCAGATAAAAGACTCTCATGGAGATTCTGCTCAAGTAATTGCAAATGTTGTTGATCTCTCCCAAAGCTATCAAATGCAGGCCATTATAGGAACTACTACACACAGCGAAGCAACACTGGCAAAAATACTACTTAGCCTCTCTTATTCTCTAAGACTTGTTGGTTCTGAGATTGATGACCATTTAGCTTTTCCTTCGTTATCAACACTTTCAGACCCAAAATCTACAATTGAAGAAGAGCTTAATAAGCTGAAAAGAAAGAGTAATAGGGTATTCTTGATTGTTCATTCTTCTTTAGAGTTGGCTAACATGCTTTGTGAAAAAGCAAAACAAATAGGTTTGATGGAAAAAGGTTCGGCGTGGATTATCCCAAATGAAGTTGCTGGCCTTCTTGATTCAGTTAACTCTTCTGTTATCTTCAACATGCAAGGTGTTGTTGGATTTAAAACACGCTTCATGGAAATGAATGAGACCTTTAGAAAATTGAAATTGAAATTCCAAAGAAAGTTTGCACTAGAATACCCTGAAGAAGATAACATTAACCCAAGTATCTTTGCACTTCAAGCATATGATGCAGCTAAAGCTATTGTTGAAGCTGCAAATAAATCATCACAAGGAAAGTTAAGACTTGAAGAAATCTCCGAAACGATTTTGTCACCAACCTTCAACATAATTAATGTGATAGGGAAAAGCTACAGAGAAATGGCATTTTGGTCTCAGACACTCGGTTTTTCTAAGAACTTTATTAGCCATCAAGTAATGGAGACGAGAAAAACAAATAATGATTCTAATGGAGTTTTCAGAACAGTTTATTGGCCTGGAGATCAGATGCAATTGGTTCCTAAGGGATGGACTCTAAGTAACAATGAAAGGTCATTGAAAATAGGAGTACCTTCCAATGGTGCCTTTAATCAGTTTGTGAACGTAACACACGACAAGCTCATGAATGAAACTTTTATCACCGGTTTCTCGATCGATGTCTTTAAAGCAGTTGTTGGACTTTTACCGTATGATTTACAATACAAATTTGTTCCCTTCAATGGATCATATGATGAAATGGTTGACCAGGTCTACAATAAGACATTAGATGGTGCAGTTGGTGATACAGATATAATGGCATATAGATATCATTTAGTTGACTTCTCACAACCTTATGTTGAATCTGGCCTCCACATGGTGGTTACCGAGCAACCCGAAAAATCAAAACAAACATGGATGTTTTTGGATGCCTTTACAAAAGAGATGTGGTTGATGATAACATCAATGCATATTTTTGTAGGAGTTGTTATTTGGTTGATTGAAAGGGAAGCTAATCCATATCTAAGGGGATTTAGGTCTATGCTTTGGTTTTTAGTCACTGTACTATTTTATGCACACAGAGAACCAATAAGAAGACCATTGGCTCAAGTTGTACTAACACCATGGTTATTTGCTATTTTCATTGTAACAAATAGTTTCACAGCAAGTTTAACATCCATAACAATTTCACAAGTAAAGTCATCTGTGTTAGATATCCAAACCCTTAAAGAAAGAAATTTACCAGTTGGATGTAATGGAAATTCATTTATTGTGAAGTATTTGTCTGAAGTACTGAAATTCAAGCCTGAGAACATTAGAAAATTCAATTCCATTAATGACTACCCTGCTGCCTTTGAGAACAAGAAAATAGAAGCCGCCTTTTTTGTCGCACCTCACGCTAAAGTATTTCTAGCAAAGTACTCATGTAAGGGTCTCATCAAAGCAGGAAACACTTTCAAGCTTGGTGGCTTTGGCTTTGTGAGTTTCTCTCCTTTCATTATCACTGATTTTTGA 1974 0.3652 MVQRVNSLVPQRTNNISIGAVLDLGSLMGKHQKIAIEIAVHEFNNQTSSSSKLDLQIKDSHGDSAQVIANVVDLSQSYQMQAIIGTTTHSEATLAKILLSLSYSLRLVGSEIDDHLAFPSLSTLSDPKSTIEEELNKLKRKSNRVFLIVHSSLELANMLCEKAKQIGLMEKGSAWIIPNEVAGLLDSVNSSVIFNMQGVVGFKTRFMEMNETFRKLKLKFQRKFALEYPEEDNINPSIFALQAYDAAKAIVEAANKSSQGKLRLEEISETILSPTFNIINVIGKSYREMAFWSQTLGFSKNFISHQVMETRKTNNDSNGVFRTVYWPGDQMQLVPKGWTLSNNERSLKIGVPSNGAFNQFVNVTHDKLMNETFITGFSIDVFKAVVGLLPYDLQYKFVPFNGSYDEMVDQVYNKTLDGAVGDTDIMAYRYHLVDFSQPYVESGLHMVVTEQPEKSKQTWMFLDAFTKEMWLMITSMHIFVGVVIWLIEREANPYLRGFRSMLWFLVTVLFYAHREPIRRPLAQVVLTPWLFAIFIVTNSFTASLTSITISQVKSSVLDIQTLKERNLPVGCNGNSFIVKYLSEVLKFKPENIRKFNSINDYPAAFENKKIEAAFFVAPHAKVFLAKYSCKGLIKAGNTFKLGGFGFVSFSPFIITDF* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0932 657 Gene3D - 98 235 - -
Mtr7g0932 657 SMART GluR_14 346 656 IPR001320 GO:0015276|GO:0016020
Mtr7g0932 657 Gene3D - 459 597 - -
Mtr7g0932 657 PANTHER GLUTAMATE RECEPTOR 96 648 - -
Mtr7g0932 657 PANTHER GLUTAMATE RECEPTOR 14 95 - -
Mtr7g0932 657 Pfam Bacterial extracellular solute-binding proteins, family 3 374 641 IPR001638 -
Mtr7g0932 657 Pfam Receptor family ligand binding region 132 261 IPR001828 -
Mtr7g0932 657 SUPERFAMILY Periplasmic binding protein-like I 11 337 IPR028082 -
Mtr7g0932 657 Gene3D - 342 458 - -
Mtr7g0932 657 SUPERFAMILY Periplasmic binding protein-like II 334 647 - -
Mtr7g0932 657 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 96 648 - -
Mtr7g0932 657 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 14 95 - -
Mtr7g0932 657 Pfam Ligand-gated ion channel 467 566 IPR001320 GO:0015276|GO:0016020
Mtr7g0932 657 Gene3D - 13 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0932 Mtr-Chr7 18190825 18195099 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0932 57 646 Ion Channels AT5G11210 31.442 4.02e-92 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0932 - - mtr:MTR_5g059920 884.404