Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0891 ATGGCGAATACGAGCGGCGTTAGAAAAGGTGCATGGACATATGAAGAAGACAACTGTCTCAAGGCTTACATTCTCAAGCATGGTGTAGGAAAATGGCATTTAATTCCTGAAAGAACAGGATTGAATAGGTGTCGAAAAAGTTGTAGATTAAGATGGGTAAATTATTTAAACCCTTACATCAACAGGGAGGACTTTTCTAAGGATGAAGCTGATTTAATTTTAAGGTTACACAACCTCCTAGGGAATAGATGGACATTGATTGCTGCAAGACTTCAGGGTAGATCAGCTAATGATGTGAAAAACTATTGGAACACCCATTTGAGAAAAAATGTTGTTTTAGGAGCAAAAGAAAACACAGAAAAAGAGAAACCTAATGAAATCATTAAAGCTCATGATGCTATTAAAGAGCCTCGGTTGAATGTTAAACCTAATCCTGTGACTCATCCATTATTGACTTCAAAAACATTTGGTGATGTTTCCAGAGATCGTGATGACTCATCAGACACTATGGTTCCCGATCAAATTGATTCACAACCAAATCTAGATAATGCCCCGATACTATGTTTGCAATCTGGTTGCTCTTCATCACAAGAGGGGAAATATAAGCTTTTCAAATGGTTATGA 624 0.3718 MANTSGVRKGAWTYEEDNCLKAYILKHGVGKWHLIPERTGLNRCRKSCRLRWVNYLNPYINREDFSKDEADLILRLHNLLGNRWTLIAARLQGRSANDVKNYWNTHLRKNVVLGAKENTEKEKPNEIIKAHDAIKEPRLNVKPNPVTHPLLTSKTFGDVSRDRDDSSDTMVPDQIDSQPNLDNAPILCLQSGCSSSQEGKYKLFKWL* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0891 207 SUPERFAMILY Homeodomain-like 6 103 IPR009057 -
Mtr7g0891 207 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 4 60 IPR017930 -
Mtr7g0891 207 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Mtr7g0891 207 CDD SANT 11 56 IPR001005 -
Mtr7g0891 207 CDD SANT 65 107 IPR001005 -
Mtr7g0891 207 Gene3D - 2 62 - -
Mtr7g0891 207 PANTHER TRANSCRIPTION FACTOR MYB113-RELATED 5 148 - -
Mtr7g0891 207 ProSiteProfiles Myb-like domain profile. 4 56 IPR001005 -
Mtr7g0891 207 MobiDBLite consensus disorder prediction 139 178 - -
Mtr7g0891 207 SMART sant 61 109 IPR001005 -
Mtr7g0891 207 SMART sant 8 58 IPR001005 -
Mtr7g0891 207 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 5 148 - -
Mtr7g0891 207 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 111 IPR017930 -
Mtr7g0891 207 Pfam Myb-like DNA-binding domain 62 107 IPR001005 -
Mtr7g0891 207 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Mtr7g0891 207 Gene3D - 63 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0891 Mtr-Chr7 15996273 15998742 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0891 6 109 MYB Transcription Factor Family AT1G66370 70.192 3.71e-48 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr7g0891 Myb_DNA-binding 1.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0891 - K16166 mtr:MTR_5g078930 280.411