Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0831 ATGGACAAAAAAGAGTGCAGTTCTTCACAAGATCCTGATGTACGAAAGGGACCATGGACAATGGAAGAAGACTTGATCTTGATCAACTATATTGCCAATCATGGTGAAGGTGTTTGGAACTCCTTGGCTAAATCTGCTGGTCTTAAACGTACCGGAAAGAGTTGCAGGCTTCGGTGGCTAAACTATCTTCGACCGGATGTTAGACGAGGGAATATTACACCTGAGGAACAACTCTTGATCATTGAACTTCATGCTAAGTGGGGAAACAGGTGGTCGAAAATTGCGAAACATCTACCGGGAAGAACCGATAATGAGATAAAGAACTACTGGAGGACAAGGATCCAAAAGCATATCAAGCAAGCTGAGAACTCTCAATCTCAAGAACAAGGTTCTGATATTCAAATAAATGATGATAATAATAATAATCAACTTATAGGAAGCACAAGCCAAATTTCCAACATTGCTGAACCTATGGACACAAATATTATATCACCACCCTCTTACCAAGGAATTTTGGAACCATTTCCACCTCATCATCAGTTCCCTACAATCTCTGATCAATCAGGTTGTTCTAACTACTGGAGCATGGAAGATCTCTTGTCACTTCAACTACTAAATGGTGATTAA 627 0.4003 MDKKECSSSQDPDVRKGPWTMEEDLILINYIANHGEGVWNSLAKSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIIELHAKWGNRWSKIAKHLPGRTDNEIKNYWRTRIQKHIKQAENSQSQEQGSDIQINDDNNNNQLIGSTSQISNIAEPMDTNIISPPSYQGILEPFPPHHQFPTISDQSGCSNYWSMEDLLSLQLLNGD* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0831 208 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Mtr7g0831 208 Gene3D - 16 68 - -
Mtr7g0831 208 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Mtr7g0831 208 CDD SANT 73 112 IPR001005 -
Mtr7g0831 208 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Mtr7g0831 208 Pfam Myb-like DNA-binding domain 69 112 IPR001005 -
Mtr7g0831 208 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Mtr7g0831 208 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 205 IPR044676 GO:0003700|GO:0006355|GO:0043565
Mtr7g0831 208 CDD SANT 18 63 IPR001005 -
Mtr7g0831 208 PANTHER TRANSCRIPTION FACTOR MYB21-RELATED 1 205 - -
Mtr7g0831 208 SUPERFAMILY Homeodomain-like 13 110 IPR009057 -
Mtr7g0831 208 MobiDBLite consensus disorder prediction 120 145 - -
Mtr7g0831 208 SMART sant 15 65 IPR001005 -
Mtr7g0831 208 SMART sant 68 116 IPR001005 -
Mtr7g0831 208 Gene3D - 73 143 - -
Mtr7g0831 208 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0831 Mtr-Chr7 13547132 13552628 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0831 10 208 MYB Transcription Factor Family AT3G01530 57.789 7.82e-75 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr7g0831 Myb_DNA-binding 6.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0831 K09422 - gmx:100816972 320.087