Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0825 ATGCCTCCAAAGAAGAAACCTAACAATTCATCATCATCATTTTCATCTTCAAAGAAACCCAATCCACAACCATCCAAATACGGTATTCAACACTTCTTCGATCGCCACACAACTCAACAACAAAACTCTCAGAAACTTCAATCCAACAATTCAAATGCAACATCTCAAGTTGCTGATGCTGCTTCCGATTCTCGACCACCGCCGGAAAAATCTACCGATGCTGTTAATGAGGCTGATACGTTATCTGAGGTGTCTCCAGAGATGTCGAAGACTATGTCGCGGAAACGGTTTAAATTCTCGCCTGGAATGTTCATCAAGCAGAGTCAGGATGATGGGGCCGATGAGGTTACATGGAAGATATCTCCAGTGAATGAAAGGCTTCAAGCAGTTTCAAAACGCATGCCTAAGATAATTCAAGCATTGGCTGAATCTTCGAGGGCCAACATGTTGCAAATTCGCCGCTGCTCAGAAGATAAGACTTCTCTGGATAAAGGTGATAAGGCTGACGAGTTGCTTATTACATCAACTCCCAATGCATCTACAAAAGCTCCGTTGTCATTGAGTAAATTAGGCCTGAAAAAATTGAACCCTGACCGAGGTGTGGACTGTAATGGCAATCCAACTACTCTGAGCAACTCTTCAGTGGCTGTTGGAAGAAATCCCTTCAGAACACCACCATCTTTGTCTTGTCGCGAGCTTGCCAAGGATGATGAGCACAACGGACCATCTGACCAGCCTTTTTTGAGGCAGCACAAAAAGGCATTGCTTGAACTTTTAGATCAAGTCGAAGATGCAATTGGTGTTGATAATGATACAGTTTGTGATAAAACCACTCATTCCTGTAATTCACAAGATGGAATTGCTGACGGGCTACCTGTCAGAGCCAACCATCTAGTTGAAAGGACTAAATCACATATACCTAAAGAGGTTGTTAGTGTTTTCTCCGATTCTAGTTATTTGGTTTTGGAGGTATCTGAAAAATCGCAACCTGCTGCTAAAGGCCCATACAAGGTGCTTCGTTTACTAAATGAACAAAGTGGAGAAGAGCGAGCTGTAAACTTGTGGGATGAATGGTCTTACAGTGTAGTCGCACCTGGAAATACTGTGAACATAATTGGTGAATTTGACGAAGGGGGCAGTTGTGATATTAATCATGATAATAATTTTTTGATTGTACACCCGGATATTCTTGTGTCTGGAACACGGGTCGCTTCCAGTTTTACTTGCCCAAGGAGAACTGTCTTAGATGAAAGGCTAAAATGCAATGAGTACTCAACTGCAGCTTTATGTGGAACCTTGCTTCACCAAATTTTTCAGGCTGGGCTTACAAATGACAATCCTACAATAGACTTCTTGGAGTCTTACACAGAAGTGGTTTTACAAAGAAATGTTGAAAGTTTATTTGCATGTGGAGTAAATGAAAAGGATGTTCACAAAACCATGATTGATGCTATCCCTAGAATATACAATTGGATCATGCTGTTCAGAAATATGGAGGAAAGAGAAGATCCTAACGTTAATTTTGGAAGTGTTAATGGAATGAAGAATATTGGCATATCTGAGGTAATTGATATTGAAGAAATGGCATGGGCACCAAAATATGGTTTAAAAGGGATGATTGATGCTTCGGTTAGAGTGAAGGTTCATTCTAGAAAAGATCGACCAGAGGGGAAGATCATGCCAGTAGAGTTCAAAACTGGAAAATCACCTAGTGGCCAGACATCAGTAGAACATAATGCCCAAGTAATTCTGTACACTCTCCTGATGTCTGAAAGGTACAAGAAGACCATTGATTCTGGTCTTCTGTATTATCTCCAAACAGATCAGACACAGGGAATTACGGTTCAAAGATCTGACTTAGTTGGGTTAATAATACGGCGTAATGAGCTTGCAAGTGAGATTCTCAAAGCATTAGTCTTGCAACAACTTCCACCAGTGTTACAGAGTACTAGCATGTGCAGAGGTTGTCGACATCTTAATGTCTGTAGCATTTATCATAAGGCACATGGTGGAAGCGTCGAGAACAATGGATTGGGAGATATTTTTGATTCCAATACTAATCACTTAAGATCATCTCATTCTAAGTTCCTCTGCCATTGGGATCATTTGATTGACTTGGAAGCGAAAGGGACTGAGTTCATAAAGAAAGACGTGTGGCGTTCATATAATTTGAGGAGTCGCAGCGCCGGTGGTGTTTCTTCTATTGTTATTGATGCTTCACAAGGAATACCTTATTCAACATCTCACGAAGATAATCGTTTCATTTATCGTTTTGTACCACAAGATAATTCTTATCCCTCTATAGTTTCTGATGATGATCCTTCTAGTGCCTCTTTGAAAAATGATTTGGATCTCACACTGAGAAGTGGTGACTATGTGATATTGAGTAATGAATCGAGCCATCAAACTATTGCAAAAGGGGTGATTTCAGATATTAGTCACAATCATATATCTGTTTCCTTTTCCAAGCTCTTGAGAATTCCTGGGAGGTCTTCCACGGAACATGATCTCCTTCAGCAGGTTTGGAGAATCGACAAGGATGAAGCTGTGACTTCATTTGCAATTATGAGGTTTAATCTTGTACAACTTTTTCTACAAGATGATCAAAGTGGTCATCTCCGGAGGATGATTGTTGACCTTGAGGCTCCTAGATTTGACGGTAGCTCTATAGTTAGCCATGATCCAGCAATATCTTACGTTTGGTCTGAGCAGAGTTTGAATGATGATCAACGTAGAGCAATTCTCAAGATACTTGTGGCAAAAGATTATGCACTTATATTAGGGATGCCTGGAACGGGAAAGACATCCACCATGGTCCATGCTGTGAAAGCCTTATTGATTAGAGGGACATCCATTTTACTAACAGCCTATACAAATTCTGCTGTTGATAATTTACTAATCAAGTTAAAAGCACAGGGCATTGATTTTGTACGTGTTGGAAGACATGAAGCAGTACATGAAGAGGTTAGAGGGCACTGCCTCTCAGAAACAAACGTAAAGAGTGTTGAAGATATCAAAATAAGGTTAGAACAAGTCAAAGTTGTTGCAGTTACTTGTTTGGGCATTTCCAGTCCCCTGCTTGCCAATAGGAGATTTGATGTATGCATTATGGATGAAGCTGGGCAGACCACTCTGCCGGTGTCCTTGGGCCCTCTAAGATTTGCTTCAACGTTTGTTCTTGTGGGGGATCATTATCAACTGCCACCACTTGTCCATAGTACAGAGGCCCGAGAGAATGGCATGGGGATGAGTTTATTTTGTAGGCTTTCAGAAGCTCATCCACAGGCAATTTCAGCTTTACAGAGTCAGTACCGTATGTGTCAGGGTATTATGGACTTGTCAAATGCCTTGATATATGGTGACAGACTGAGGTGTGGTACATCTGAGATAGCTAATGCCAAACTTGAGTTTTCTGGCTTAAACTGCAGTTTGCCTTGGCTAGAAAATGTTTTGAATCCCAGAAGGCCAGTGATATTTATAGATACTGATATGCTGCCTGCCTTAGAGGAAAGGGATCACAAAATTGTAAATAACCCTATTGAAGCTCACATAATCGCTGAGGTTGCAAAGGAATTGGTAAAAAATGGAATTGGAGGAGAGAACATTGGCATTATTACTCCCTATAATTCACAGGCAAACCTCATACGACATGCTACTTGCATAACATCCTTAGAGATACATACCATTGACAAATACCAGGGTAGAGATAAAGACTGCATATTAGTATCTTTTGTACGTTCTTGTGAGAACCCAACAAGCTGTGTCGCTTCTCTGCTGGGAGACTGGCACAGGATAAATGTGGCTCTTACTCGTGCTAAGAGAAAGTTGATAATGGTGGGGTCTCGTAAAACTCTATTGAAGGTTCCATTACTGAAGCTTCTGATAAAGAAAGTTGAGGAGCAATCTGGAATTTTAAATGTATCTAAGAAGGATATCTATAGTAAAGGAGAGCTGATTAGATGCTCTCAAATTTCATGTTCAGAACAAACATTAGATGTTCCTAAATGA 4008 0.4062 MPPKKKPNNSSSSFSSSKKPNPQPSKYGIQHFFDRHTTQQQNSQKLQSNNSNATSQVADAASDSRPPPEKSTDAVNEADTLSEVSPEMSKTMSRKRFKFSPGMFIKQSQDDGADEVTWKISPVNERLQAVSKRMPKIIQALAESSRANMLQIRRCSEDKTSLDKGDKADELLITSTPNASTKAPLSLSKLGLKKLNPDRGVDCNGNPTTLSNSSVAVGRNPFRTPPSLSCRELAKDDEHNGPSDQPFLRQHKKALLELLDQVEDAIGVDNDTVCDKTTHSCNSQDGIADGLPVRANHLVERTKSHIPKEVVSVFSDSSYLVLEVSEKSQPAAKGPYKVLRLLNEQSGEERAVNLWDEWSYSVVAPGNTVNIIGEFDEGGSCDINHDNNFLIVHPDILVSGTRVASSFTCPRRTVLDERLKCNEYSTAALCGTLLHQIFQAGLTNDNPTIDFLESYTEVVLQRNVESLFACGVNEKDVHKTMIDAIPRIYNWIMLFRNMEEREDPNVNFGSVNGMKNIGISEVIDIEEMAWAPKYGLKGMIDASVRVKVHSRKDRPEGKIMPVEFKTGKSPSGQTSVEHNAQVILYTLLMSERYKKTIDSGLLYYLQTDQTQGITVQRSDLVGLIIRRNELASEILKALVLQQLPPVLQSTSMCRGCRHLNVCSIYHKAHGGSVENNGLGDIFDSNTNHLRSSHSKFLCHWDHLIDLEAKGTEFIKKDVWRSYNLRSRSAGGVSSIVIDASQGIPYSTSHEDNRFIYRFVPQDNSYPSIVSDDDPSSASLKNDLDLTLRSGDYVILSNESSHQTIAKGVISDISHNHISVSFSKLLRIPGRSSTEHDLLQQVWRIDKDEAVTSFAIMRFNLVQLFLQDDQSGHLRRMIVDLEAPRFDGSSIVSHDPAISYVWSEQSLNDDQRRAILKILVAKDYALILGMPGTGKTSTMVHAVKALLIRGTSILLTAYTNSAVDNLLIKLKAQGIDFVRVGRHEAVHEEVRGHCLSETNVKSVEDIKIRLEQVKVVAVTCLGISSPLLANRRFDVCIMDEAGQTTLPVSLGPLRFASTFVLVGDHYQLPPLVHSTEARENGMGMSLFCRLSEAHPQAISALQSQYRMCQGIMDLSNALIYGDRLRCGTSEIANAKLEFSGLNCSLPWLENVLNPRRPVIFIDTDMLPALEERDHKIVNNPIEAHIIAEVAKELVKNGIGGENIGIITPYNSQANLIRHATCITSLEIHTIDKYQGRDKDCILVSFVRSCENPTSCVASLLGDWHRINVALTRAKRKLIMVGSRKTLLKVPLLKLLIKKVEEQSGILNVSKKDIYSKGELIRCSQISCSEQTLDVPK* 1336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0825 1335 Gene3D - 786 847 - -
Mtr7g0825 1335 MobiDBLite consensus disorder prediction 1 94 - -
Mtr7g0825 1335 CDD DEXXQc_DNA2 905 1105 - -
Mtr7g0825 1335 Gene3D - 848 997 IPR027417 -
Mtr7g0825 1335 Gene3D - 1004 1103 IPR027417 -
Mtr7g0825 1335 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 905 1292 IPR027417 -
Mtr7g0825 1335 Pfam AAA domain 906 997 IPR041677 GO:0004386
Mtr7g0825 1335 Pfam AAA domain 1008 1073 IPR041677 GO:0004386
Mtr7g0825 1335 PANTHER DNA REPLICATION ATP-DEPENDENT HELICASE/NUCLEASE DNA2 162 1300 IPR026851 GO:0017108|GO:0017116|GO:0033567
Mtr7g0825 1335 Pfam AAA domain 1082 1282 IPR041679 -
Mtr7g0825 1335 Pfam Domain of unknown function DUF83 555 663 IPR022765 -
Mtr7g0825 1335 Gene3D - 399 663 IPR011604 -
Mtr7g0825 1335 PANTHER DNA2/NAM7 HELICASE FAMILY 162 1300 IPR045055 -
Mtr7g0825 1335 MobiDBLite consensus disorder prediction 32 61 - -
Mtr7g0825 1335 MobiDBLite consensus disorder prediction 197 222 - -
Mtr7g0825 1335 MobiDBLite consensus disorder prediction 202 220 - -
Mtr7g0825 1335 Pfam DNA replication factor Dna2 344 546 IPR014808 -
Mtr7g0825 1335 CDD SF1_C_Upf1 1106 1282 IPR041679 -
Mtr7g0825 1335 Gene3D - 1104 1317 IPR027417 -
Mtr7g0825 1335 MobiDBLite consensus disorder prediction 7 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0825 Mtr-Chr7 13330023 13347849 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0825 1 1047 Core DNA Replication Machinery Family AT1G08840 54.259 0.0 1090
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0825 K10742 - gmx:100799415 1766.51