Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0820 ATGTCTAGGGAATTTGGCTTTATCAAAGATCTAAAAAAGGACGTAAATGTTTGTAAAGTTGGTTTTAGAGTTCTTGACTTATGGACTGTCACTGCTAGCAATGGTCGTCAGCATCTCGAACTTATAATTTGTGATGGAAAGGGTGACAGAGCTCATGCGATAACTCGACAGGCCGACTTTCAGCGTTTGAAGTCATCGATTGAAGAAAACCAGACCTATGTTTTGCATAATTGTCTTATGTTCGATAATGATGTTTTATTCAAACCTGTGGATTATCCATTTAAGTTGGTATTTGGTGCTGGTACAAAGGTCACAAGGAGTGATAAGCTCACTGATATTCCTTCTCATGAGTTTAGATTTAAGTCATTTAAGGAGATTGGAGAAGGGGTATTTAAAGATGATGTTTTATATGAAATCATCGGTGTTATCCATGAAATTGGTAAGACAACAGTTATTGGTGATGGGAAAAAACCTTGCACTAATATTGTGCTGAGAGATGAGAGTGGAAATTTGGTGGATGTGACCTTATGGGATAAATATTCTGTGCAACTGATGACATTTCTTGCTGAGCGGAAAGATAGAGGGTCAGTTATTTTGATACTAACTCACGCTCAATGCAAGCTTGCAGATAATGGTAAGCCAAATCTTTGCAACAATTGGTCGGTTTCTAAGTTGCTTATTAATTTGAAGCATCCAGTTGTTGAGGCATTTAGAGCTAGTCTTCAAGCTCAGGGCCATAGGTTTGATCAGAGCTTATGTCAGGTTTCATCCTCTTCTCAACGTGTCAACTATGATGAGTTTTCGAATCTCTCTGGTGTTAAATCTATTGCTGAGTTTAGAGATTTCGATAAGGATACCTATTGTATTACTGTTGCGAAGTCACTTAAGTTCAATCCTAATCGATATGGATGGTATTATGAAACCTGCACTAAGTGTACCAAAGCTTCAAGGTCGGGTGGTGCGAGTTACAAATGCTCATGTGGGGAGGAAGTTGAGGTTCCGCTGACTAGGTATAAGGTCGTTGTGATAATGGAGTATCGTGATCATAAGGCTGAATTTTTATTTTGGGACAAGGAATGTTTTCAAATTCTTGGAGTTGCTGCTGATACTCTTAGAAAGACAATGCAACAGGTTGGTGAGGATGATCCTCATATATATCCTGAAGTTCTAGACAAGTTGCTTAAGATTGAATTTGCATTGCGTGTAAAGTATCAGCTAGGTGCAGAAGGTTAA 1233 0.3852 MSREFGFIKDLKKDVNVCKVGFRVLDLWTVTASNGRQHLELIICDGKGDRAHAITRQADFQRLKSSIEENQTYVLHNCLMFDNDVLFKPVDYPFKLVFGAGTKVTRSDKLTDIPSHEFRFKSFKEIGEGVFKDDVLYEIIGVIHEIGKTTVIGDGKKPCTNIVLRDESGNLVDVTLWDKYSVQLMTFLAERKDRGSVILILTHAQCKLADNGKPNLCNNWSVSKLLINLKHPVVEAFRASLQAQGHRFDQSLCQVSSSSQRVNYDEFSNLSGVKSIAEFRDFDKDTYCITVAKSLKFNPNRYGWYYETCTKCTKASRSGGASYKCSCGEEVEVPLTRYKVVVIMEYRDHKAEFLFWDKECFQILGVAADTLRKTMQQVGEDDPHIYPEVLDKLLKIEFALRVKYQLGAEG* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0820 410 CDD RPA1_DBD_B_like 139 241 - -
Mtr7g0820 410 Gene3D - 4 106 IPR012340 -
Mtr7g0820 410 Gene3D - 252 407 IPR012340 -
Mtr7g0820 410 SUPERFAMILY Nucleic acid-binding proteins 273 405 IPR012340 -
Mtr7g0820 410 PANTHER FHA DOMAIN PROTEIN 3 405 - -
Mtr7g0820 410 Gene3D - 111 251 IPR012340 -
Mtr7g0820 410 PANTHER MICROSPHERULE PROTEIN 1 3 405 IPR037912 GO:0002151|GO:0031011|GO:0071339
Mtr7g0820 410 SUPERFAMILY Nucleic acid-binding proteins 118 247 IPR012340 -
Mtr7g0820 410 Pfam Domain of unknown function DUF223 40 136 IPR003871 -
Mtr7g0820 410 SUPERFAMILY Nucleic acid-binding proteins 4 112 IPR012340 -
Mtr7g0820 410 CDD RPA1_DBD_A_like 19 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0820 Mtr-Chr7 13215463 13217564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0820 43 380 Core DNA Replication Machinery Family AT5G08020 23.295 4.14e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0820 - - mtr:MTR_8g076570 823.928