Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0816 ATGGGAGTTCACGGTCTCTGGGAACTACTCTCCCCCGTCGGTCGCCGCGTCTCCGTCGAAACCCTCGCCGGAAAAACACTTGCCGTCGACGCGAGTATATGGATGGTACAGTTTATCAAAGCGATGCGTGACGAGAAAGGTGAAATGGTTCGTAACGCTCATTTGCTTGGATTCTTCCGTCGTATTTGTAAGCTTTTGTTTCTTAGAACCAAGCCGGTTTTCGTTTTTGACGGTGGTACGCCGGCGTTGAAGCGGCGGACTGTTATTGCTCGTCGGAGGCAGCGGGAGAATGCTCAGGCGAAAGTTCGTAAGACGGCCGAGAAATTGCTTCTTAATCACTTAAAGGCATTGAGGTTGAAAGAGCTGGCTGATGATATTAAGAACCAGAGACTGACGCAAAAGAGTGGCAAGAAGTCCCAGGAAAAATCTAATCAAATGGACTCTGTCGGTAGTGATTTAGAGAAAAGTCACACAAAAGAGCTAGAAGAAATGCCTGCATCTCTTTCTGTTGCTAAGGAGGACAGAAATCCACCGCAGACTAAAATATCGTCAAGTTACAACCAAGAGGAGCTTGATGAAATGTTGGCAGCATCTATAGCTGCCGAGGAAAATGAAATACGATCCAGAGAAGGAATGACATCTACTGTAATTAATTCTTCAGATGCAGACGAAGAGACTATACTGCTCACAGCCAATGAGGAAGTTGATTTAGCTGTTTTAGCTGCTCTGCCACACTCGATGCAACTTGATATTCTTGCGCAGCTCAAAGGGAAGAAAGCAGAAGGACCAATGAAGCAAGTTGACAGCCAAATAAGACATGGGGTCAGTGATTGTGGCAAGGGTAAAGGGATTATTTTCAATGAAACTGACATGGTTGGGTGTAGCTCAAAATGCGACGTGAACGGGACATCAAGCAGTGACAATCAAAACAGAATTGATGAAATGTTAGCCGCATGTATCGATATGGAGGAAAATGCGAAGTTAGTAAAAAATGTAACAAGTTCAAGTTCTCTCGGGAATTCCACCAATAAGGAAAAGGATGGTAACTATGATGAAGATGAAGACGAAGAGATGATACTGCCATCTATGCACAGTGAAGTTGATCCAGCTGTTCTTGCCTCTCTGCCTCCGTCAATGCAACTGGACCTGCTTGTTCAGATGAGAGAGCGGTTGATGGCAGAGAACAGACAAAAGTATCAAAAAGTCAAGAAGGATCCTGCAAAGTTCTCTGAGCTACAAATAGAAGCTTACCTTAAAACTGTTGCTTTCCGTCGCGAGATAAATGAAGTGCAGAAGGCTTCTGTTGGAGGAGGAGTAGGTGGGGTACAAACTTCACGGATTGCATCTGAAGCCAACCGAGAGTATATATTCTCGTCATCTTTTTCCGGTGACAAACAAGGACTTGCCTCCACCAGATTAGAGAGAAATGTTGAAGATACACAACAAATGCAACGGGGAACACATCCTTCACATAATTTTGTAAATAACATAACTGCAGGAAATGTTTCCAAGACTTCAGCTGGATTGGTTGGTAATGATTCTAGTGAGCCTGTTGATGAAAGTATTGAGACATATCTAGATGAGAGGGGTCGGTTTCGAGTTAGTAGGTCAAGAGCTATGGGGATGCGTATGACCCGCGATATTCAAAGGAATTTGGATTTGATGAAGGAGATTGAGCATGACAGAACAGATGTGAACAAGGTTGATAACATTGAAACAGTGCCTAATACAGATAATAGTCCTTTAGAATGTTCTGGGAATCAGCTTAGTTGTAAAGCACAAGAGGTGAATTTAGAATTAGTTGGAGAGAATGTGGAAAATGAGAAATTAATGCTTGGTAAGGATACTTCTATAGAGATATCCTTTGAATATGATTGCAAGAATGAATTTGCAAGCGGTGGGGATGATATATTTGCCAGTTTAGTAGGAGGGATATCTTTGGAGCACTCTCATGCTGATGATACTGTGGTGAATGTGCAACCTTCTGGTTCTGATTCAGATTGTGATTGGGAAGAAGGAACTGTTCAGGATAAGAATACAATTTTTCCTGGATATAATGAAGTGGGATTGAAGTCTTCAGGTGAGTATGATGATAATAATAATGATAATAATGACAGTGAAGTAGAATGGGAAGAAGGGGATTGTAATGGTACTACAAGTACCTTGTGTCCAGCTGAGTCGGGAAAGGTGGCATCAAAAGGGCACTTGGAAGAGGAGTCTGATTTACAGGAGGCGATTAGGAGAAGTATTGAGAGTACTCAGGATGGGAAACTTAAATACGTGTCATCTTCAGACGAGCATTCAAGTGCCTGTGAGAATAAATTAGATCCTAATTTAGAACATGGTGATAATGGTGGTTTTGGCTCAAACCCAATGGATTTAAATGATAGTATGGTGGATTCCAATTTGCCTAGGGAAGGTCATAATGAACAAAGTGAATTACATGAAACTGTAGGAGACAAAAGGGAAAATCATGTGACTAGAAACAACCGAGAAACTTCCCATTTCAACGGAAGTCAGTTAAAGTCATTTGTGGCAATTAATTCCAATAACACAGATACATTGATTAACGAACCTAGCAAACTGGATGGACATGATATTTTCGAAAATTCAATTTCAGATACAACTGCCATGATGATGGATGAAGTTCCTAATCCTATTGTTGCAGAGGAATCATTGGATAATCATAATGATGGTAAAACTTCTCTCTGTTGTAACAGTTTGTCCAATGTTGGTGTGACTGAAGAGGACAAAAATAAGCTTATTAATGAATCTGAACCAATGAGTAATTCTACTGACAATACAAATACTGCTATTCTTTCCATGGACTCATCTTTAAAAGGAGCTAAAAAAGACATTGATATGGAGCTAAAATTGCCTTCAGTTAACAATGATGGAAATTTTTCTATGGAAAGGACTAGTAACGTCTCCCAAGGCTCGATGAACGTCCCAGGAGATTTTCCTGTACAATTGGATGAGGTTCAATTGAATGAAGAAATGCAAATTCTTGATCGGGAATATAGGAACCTAGAAAATGAGCAGAGGAAGCTTGAGCGTAATGCAGAATCTGTTGACAGTGAATTATTCACTGAATGTCAGGAACTACTGCAAATGTTTGGCTTGCCATATATTATTGCTCCTATGGAAGCTGAGGCACAATGTGCGTACTTGGAACTCTCTAAACTGGTTGATGGTGTTGTCACCGATGACTCTGATGTCTTTTTATTTGGGGCACGCAGCGTTTACAAGAACATATTTGATGATCGCAAATACGTAGAGACATACTTCATGGAGGATGTTGAAAAGGAGCTTGGATTGAACAGAGAAAAATTAATTCGCATGGCACTTCTTCTCGGGAGTGACTATACTGAAGGTGTAAGTGGGATTGGCATTGTTAATGCTATTGAGGTTTTAAATGCGTTCCCTGAGGAAGATGGATTACTGAAATTCCGGCAGTGGGTTGAGTCACCAGATCCCACCATCCTTGGAAGGTTGGATGCAAAATCTGTATCTAAGAAAGGGTCAAAACTTGAAGAAAAGGAGTCGCCTGATTACATCCAAGAAACAAAGCAAACTTTCATGGATAAGCATAGAAATGTTAGCAAGAATTGGCATATTCCTTCTTCTTTTCCAAGTGAAACAGTTATATCTGCTTACATATCTCCACAAGTTGATAAGTCAACTGAGCCTTTCGCATGGGGAAAGCCAGATCAGCTTGTTCTTCGCAAAATGTGCTGGGAGAAATTTGGGTGGTCTAGCCAGAAAGCAGATGAGTTGTTATTACCTGTTTTAAAGCAATACAACAAACATGAGACTCAACTGCGTTTGGAGGCATTTTATAGTTTCAATGAAAGATTCGCAAAAATTCGTAGCAAGAGAATCAAGAAAGCAGTAAAAGGAATTACTGGTAAGCCACCTTCAGATTTAATAGCTGATTCTTCAGGGAGCATGTCCAATGGTACAAAAAATGGGATAGGAAGTTCTGTTGACCCTGAGGATGACAAATTGGAGACTTCAAAGGGAACAGATAAAAGTCTTGCAGCTAGGAAGAAATCGAAAGCAAAAGAGTCAACGAAAAGGAAAAATGATGGGAATACTGTTGCTAAGCAACATACAAAGAAAAAGAAAATAAATGATGTTTCTTCTTCTGCACCTGCTGCATCTGAGATTGAGAATTTACAGCCATGTATGCAAACAGAAGGGCAATATGATGGTGAGGATTTAGTTCAGATAAAAAGTAGCCGTGGGCGAGGAAGAGGTAAAGGTGTAGGAGTGACAAGAGGCAGGGAGAAGAAAAGTCGTCATTTTCAACCGTCTGAAACTGAAACATCATCTAGTAGTCTTGATATTGACAATCACGAGCCAAGAGCACAAGTTGATTTGTCATCAGTTCCTGATGTTAAGCGAAGGTCAATGCGATCTCGGAAACCTGTCAACTATTCTTTCGAGGACCTTGAAGTTGAAGATGCTGTTGATTCATTTGATCAGAGCAATCAGAAATGCTTGCGTCGAGAGCTAGTAGAAGAAAAATCTATGTGCATTGATGGTTCCAGCATAGGGAAAGAAAGCGGTATGCTAGAAATTCCTCTGAAGGATAACTTGCCGGCAGACTATCTGGAGCCAGAAACAGATGCTGGTGCAGCAACACCAAGGACTCACCCTTCAGATGACTATCTTGAAATGGGAGGTGGATTCTGTGTAGACGATAGTGAGATGGATAACAACCATGATGCAATTGATGATATGAACACGAGTACTGCAAACTCTCCACCCTTTTCTGAATTATTGGGTGAAACCGATCGTGATAAAAGTAGTTCAGATATATTATTTTTGGGTGCCGAAAAGGCTACAAGTGAGACACAACATGGAGGGGAATGTAAAAACTCCAACAAACTGCCAAATGACCATCTTCTAAATGCTGACATAGGGGTATTAATACCAGAGAATGCTCATCACAATAGTGAGAGCTCCAATGTAGCTTTTAGCGCTATGCCATTTTTGAGGAAGAAAAGAAAGAAATGA 5022 0.4088 MGVHGLWELLSPVGRRVSVETLAGKTLAVDASIWMVQFIKAMRDEKGEMVRNAHLLGFFRRICKLLFLRTKPVFVFDGGTPALKRRTVIARRRQRENAQAKVRKTAEKLLLNHLKALRLKELADDIKNQRLTQKSGKKSQEKSNQMDSVGSDLEKSHTKELEEMPASLSVAKEDRNPPQTKISSSYNQEELDEMLAASIAAEENEIRSREGMTSTVINSSDADEETILLTANEEVDLAVLAALPHSMQLDILAQLKGKKAEGPMKQVDSQIRHGVSDCGKGKGIIFNETDMVGCSSKCDVNGTSSSDNQNRIDEMLAACIDMEENAKLVKNVTSSSSLGNSTNKEKDGNYDEDEDEEMILPSMHSEVDPAVLASLPPSMQLDLLVQMRERLMAENRQKYQKVKKDPAKFSELQIEAYLKTVAFRREINEVQKASVGGGVGGVQTSRIASEANREYIFSSSFSGDKQGLASTRLERNVEDTQQMQRGTHPSHNFVNNITAGNVSKTSAGLVGNDSSEPVDESIETYLDERGRFRVSRSRAMGMRMTRDIQRNLDLMKEIEHDRTDVNKVDNIETVPNTDNSPLECSGNQLSCKAQEVNLELVGENVENEKLMLGKDTSIEISFEYDCKNEFASGGDDIFASLVGGISLEHSHADDTVVNVQPSGSDSDCDWEEGTVQDKNTIFPGYNEVGLKSSGEYDDNNNDNNDSEVEWEEGDCNGTTSTLCPAESGKVASKGHLEEESDLQEAIRRSIESTQDGKLKYVSSSDEHSSACENKLDPNLEHGDNGGFGSNPMDLNDSMVDSNLPREGHNEQSELHETVGDKRENHVTRNNRETSHFNGSQLKSFVAINSNNTDTLINEPSKLDGHDIFENSISDTTAMMMDEVPNPIVAEESLDNHNDGKTSLCCNSLSNVGVTEEDKNKLINESEPMSNSTDNTNTAILSMDSSLKGAKKDIDMELKLPSVNNDGNFSMERTSNVSQGSMNVPGDFPVQLDEVQLNEEMQILDREYRNLENEQRKLERNAESVDSELFTECQELLQMFGLPYIIAPMEAEAQCAYLELSKLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMEDVEKELGLNREKLIRMALLLGSDYTEGVSGIGIVNAIEVLNAFPEEDGLLKFRQWVESPDPTILGRLDAKSVSKKGSKLEEKESPDYIQETKQTFMDKHRNVSKNWHIPSSFPSETVISAYISPQVDKSTEPFAWGKPDQLVLRKMCWEKFGWSSQKADELLLPVLKQYNKHETQLRLEAFYSFNERFAKIRSKRIKKAVKGITGKPPSDLIADSSGSMSNGTKNGIGSSVDPEDDKLETSKGTDKSLAARKKSKAKESTKRKNDGNTVAKQHTKKKKINDVSSSAPAASEIENLQPCMQTEGQYDGEDLVQIKSSRGRGRGKGVGVTRGREKKSRHFQPSETETSSSSLDIDNHEPRAQVDLSSVPDVKRRSMRSRKPVNYSFEDLEVEDAVDSFDQSNQKCLRRELVEEKSMCIDGSSIGKESGMLEIPLKDNLPADYLEPETDAGAATPRTHPSDDYLEMGGGFCVDDSEMDNNHDAIDDMNTSTANSPPFSELLGETDRDKSSSDILFLGAEKATSETQHGGECKNSNKLPNDHLLNADIGVLIPENAHHNSESSNVAFSAMPFLRKKRKK* 1674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0816 1673 SUPERFAMILY PIN domain-like 2 1121 IPR029060 -
Mtr7g0816 1673 SMART HhH_4 1108 1141 IPR008918 GO:0003677|GO:0003824
Mtr7g0816 1673 PRINTS Xeroderma pigmentosum group G protein signature 2 19 IPR001044 GO:0003697|GO:0004519|GO:0005634|GO:0006289
Mtr7g0816 1673 PRINTS Xeroderma pigmentosum group G protein signature 54 77 IPR001044 GO:0003697|GO:0004519|GO:0005634|GO:0006289
Mtr7g0816 1673 PRINTS Xeroderma pigmentosum group G protein signature 96 118 IPR001044 GO:0003697|GO:0004519|GO:0005634|GO:0006289
Mtr7g0816 1673 PRINTS Xeroderma pigmentosum group G protein signature 646 664 IPR001044 GO:0003697|GO:0004519|GO:0005634|GO:0006289
Mtr7g0816 1673 Coils Coil 993 1027 - -
Mtr7g0816 1673 MobiDBLite consensus disorder prediction 152 169 - -
Mtr7g0816 1673 MobiDBLite consensus disorder prediction 1297 1387 - -
Mtr7g0816 1673 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 24 38 IPR006084 -
Mtr7g0816 1673 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 72 91 IPR006084 -
Mtr7g0816 1673 Pfam XPG N-terminal domain 1 97 IPR006085 GO:0004518
Mtr7g0816 1673 Gene3D - 990 1105 - -
Mtr7g0816 1673 MobiDBLite consensus disorder prediction 1423 1438 - -
Mtr7g0816 1673 Gene3D - 1106 1194 - -
Mtr7g0816 1673 SMART xpgineu 1037 1106 IPR006086 GO:0004518
Mtr7g0816 1673 SMART xpgn3 1 98 IPR006085 GO:0004518
Mtr7g0816 1673 MobiDBLite consensus disorder prediction 754 800 - -
Mtr7g0816 1673 MobiDBLite consensus disorder prediction 1410 1473 - -
Mtr7g0816 1673 MobiDBLite consensus disorder prediction 690 721 - -
Mtr7g0816 1673 MobiDBLite consensus disorder prediction 1538 1557 - -
Mtr7g0816 1673 PANTHER DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED 285 1673 - -
Mtr7g0816 1673 PANTHER DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED 1 260 - -
Mtr7g0816 1673 MobiDBLite consensus disorder prediction 332 355 - -
Mtr7g0816 1673 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 1106 1288 IPR036279 -
Mtr7g0816 1673 MobiDBLite consensus disorder prediction 1309 1326 - -
Mtr7g0816 1673 PANTHER DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS 1 260 - -
Mtr7g0816 1673 PANTHER DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS 285 1673 - -
Mtr7g0816 1673 ProSitePatterns XPG protein signature 2. 1040 1054 IPR019974 GO:0016788
Mtr7g0816 1673 MobiDBLite consensus disorder prediction 1328 1378 - -
Mtr7g0816 1673 CDD PIN_XPG_RAD2 1023 1265 - -
Mtr7g0816 1673 CDD H3TH_XPG 1109 1226 - -
Mtr7g0816 1673 ProSitePatterns XPG protein signature 1. 70 84 IPR019974 GO:0016788
Mtr7g0816 1673 Pfam XPG I-region 1040 1121 IPR006086 GO:0004518
Mtr7g0816 1673 Gene3D - 1 170 - -
Mtr7g0816 1673 CDD PIN_XPG_RAD2 2 92 - -
Mtr7g0816 1673 Pfam Ubiquitin binding region 232 254 IPR025527 -
Mtr7g0816 1673 Pfam Ubiquitin binding region 365 392 IPR025527 -
Mtr7g0816 1673 MobiDBLite consensus disorder prediction 130 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0816 Mtr-Chr7 13152488 13165400 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0816 1031 1138 Core DNA Replication Machinery Family AT5G26680 35.135 5.47e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0816 K10846 - gmx:100820295 1995.7