Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr7g0788 | ATGGCATCTTCAAGTGCGTACTCGAATTCACCATGTGCTGCTTGCAAGTTTTTGAGAAGGAAGTGCATGCCAGATTGCATATTTGCTCCATATTTCCCACCAGAAGAACCACAAAAATTTGCAAATGTTCACAAAATATTTGGTGCAAGCAATGTAAGTAAACTTCTGAATGAAGTGCAACCACATCAAAGGGAAGATGCAGTGAACTCTCTTGCTTATGAAGCTGAGGCAAGGATAAAAGATCCAGTTTATGGTTGCGTCGGTGCCATTTCAGTCCTCCAAAGACAAGTTATTAGGCTCCAAAAGGAACTTGATGCTACTAACGCTGATTTGATTCGCTATACTACTTGCACTGAAATTCCGAATCATGATATCGCAGCTACGAGGATTGGTGGTGAAGATGGAGGTGGTTCTTCTCTTGGTCAATCTCCTCCTCCGGCATTCTACTATCCTTCTCCTTGGAACAATAATGATCCACTTGGCGATGGTTTTCACACAGGAGGAGGTGACAATATATAA | 519 | 0.422 | MASSSAYSNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVIRLQKELDATNADLIRYTTCTEIPNHDIAATRIGGEDGGGSSLGQSPPPAFYYPSPWNNNDPLGDGFHTGGGDNI* | 173 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr7g0788 | 172 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 4 | 161 | - | - | |
Mtr7g0788 | 172 | Coils | Coil | 90 | 110 | - | - | |
Mtr7g0788 | 172 | ProSiteProfiles | LOB domain profile. | 10 | 111 | IPR004883 | - | |
Mtr7g0788 | 172 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 25 | 4 | 161 | - | - | |
Mtr7g0788 | 172 | MobiDBLite | consensus disorder prediction | 131 | 172 | - | - | |
Mtr7g0788 | 172 | Pfam | Lateral organ boundaries (LOB) domain | 11 | 107 | IPR004883 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr7g0788 | Mtr-Chr7 | 12614062 | 12616199 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr7g0788 | 5 | 117 | AS2 family | AT3G27650 | 84.071 | 3.04e-70 | 208 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Mtr7g0788 | LOB | 1e-42 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr7g0788 | - | - | gmx:100306630 | 273.863 |