Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0744 ATGCTACCTTCTAGAGGAGAACCACCGTTAGTAAATGTTCTAGAAAATATAGAGTCCAATGCTGAATTGTATCAAAAGTTCAAAGCTTGGTTGGAAAAATTTTCAAAGCAGGGGCAAATTTCAATTAAAGGTCAAAAGAAGCAAAAACCATCGACAACTAGAATTTCGATCCAAGAGGTAGAATCTACTCAAATAGAACATAAAAAGCAGGATCACATGAAACAGTCACATGTTCAACAAGCCAAACTAGTGGACGGCTCTATCATGAATGGATTAAGCAACAAAGTTTATGCTCGAATCAAAAAGGACCTTGTTAATCACGGACCACCCAAGAAGCAAAAGAATACTCTGAAGCGTAAGTGGAACAAAGTTTCTGCTCAACACAAAACGGACCTTGTTAATCACAAACCAGCCAAGAAGCAAAAGATTACTCCAAAGTTGGACGACCCTTTGATGAATGGATTAAGCAACAAAGTTTATGCTCAAATCAAAAAGGAACTTGTTGATCAGGGACCATCCAAGAAGCAAAAGAATACTCCAAAGTTGGACGACTCTATGATGAATGGATTAAGCAACAAAGTTTGTGCTCAAATCAAAAAGGAACTTGTTGATCATGGACCATCCAAGAAGCAAAAGAATACTCCAAAGTTGGACCAATCTATGTTCAATGGATTAAGCAACAACTTTTCTGCTCAAGTCCAAAAGGACCTTGGTGATGATGGACCGTCGAAAAAGCAAAAGAGTACTCCAAAGATTCCTTCAATGTCACTTGATGAGTACTTTAAAAGGAGTAGGGAGCAACTTGAAGCAGAGGAGTCTGAAAATGAAGAACTTTACAGGGAACAAGAAGTTGAGGGTGAGATAAACTATGAAAATGGTGATGGTGATAATTCAATGGAAGGTAACACAAAAAAAAAAAAAAAAAGAGGAAGCACATTGTGCTTAAAAATTCATGCTCGGTCACTAGTTGATAGACAAGAAATCACCTTAAATGAAGAAGGAGAGGCCATTGTACCAAGTCAAAAGATAGTTTCTAAATTCAGCAATTTTTTGGGATCAGTAGCAAGGATGTCAGATTTATGTCCTCTTACTTACACAAATTGGAAGGCTATACCAAAGAAGAAGAAGACTATATGGGCCTATGTCAATAAAAGATACATTGTTCTAGAAAAAGGACAGAAGGATGTATATGCTATTATAAATGATGCTTGGAGGTGGTATAAATGGTTGATTAAGAAAAATCATTTTACTAAGTATAGAAACTTGTGTGAGCGGCTGAAAAACCGTCCAGACAGCATACCTGAAGCACACTTTAAGAAATTAATGACTTATTGGAGTTATGAAGCTATTCGAGAAATCAGTCATCAAAATGCTAAGAATATAGATAAACAAAAATGGAGACATCAAGCGGGTCCCATAAGCTTTGCTGTCATAAGGGAAAGATTGCGTGCAACCAAGGATGATAGAGAGCCTCCAACTCAAGCTGAAGTTTTTATTGAAACACGACAAAGCAAGAGAGGAAAGCAGTTGGACCAAGTTACAAGTGATGCAATCACAAATCTTCAAGATTTGATCACAAATTCTGATCATTCTTCGGTTGAAGCTTTTCAAACTGTCTTTGGAAAAGAAAAACCAGGGAGATTGCGCTGCTATGGAAGAGTTACAACATCTTCTCTGTTGAAAAGAAATAAAGTGGCAGATATGGAAAAAAAGCATGCTGCTGAGGTGAAAAGTTTAACTGACAAGGTCCAAGAGATGGAGACCATACATAGAAAGGATATGGCTGCAATGGAAGAAAAATTGCAAGTTCTTCTTAGAGTCATGCTGAACCAAAGCAACACAGGCATAGATATGGGGGATTTAGGAGCTTTTTTATCAACCCGAAATGATGACAATAATGTTCGACATTCATCTACATCTAATCATGAGTCAGTCATGAAGCTCACAGTGAAGACTCTGAAAGGAAGCCATTTCGAAATCAGAGTTCATCCTTCTGATTCTATAATGGCTGTAAAAACGACTATTGAAGACATTCAAGGAAAAGATAATTACCCATGCAGACAACAATTACTAATTCACAATGGAAAAGTTTTGAAAGATGAAACTACTTTAGCTGATAATGAAGTCTCTGAAGATGGCTTTCTTGTTGTCATGCTCAGTAAGGTAAATAATAGATCTATGGGTGGTGAATGTTTTGTTGATAACTACGAAGAAGAGGATGAAGAACACTTCTTTGATGAATCAGACGAAGAGGATGAAGAAAAATTCTTTGATGACTTGGATGGAGATGAGGATGAAGAATAA 2304 0.3698 MLPSRGEPPLVNVLENIESNAELYQKFKAWLEKFSKQGQISIKGQKKQKPSTTRISIQEVESTQIEHKKQDHMKQSHVQQAKLVDGSIMNGLSNKVYARIKKDLVNHGPPKKQKNTLKRKWNKVSAQHKTDLVNHKPAKKQKITPKLDDPLMNGLSNKVYAQIKKELVDQGPSKKQKNTPKLDDSMMNGLSNKVCAQIKKELVDHGPSKKQKNTPKLDQSMFNGLSNNFSAQVQKDLGDDGPSKKQKSTPKIPSMSLDEYFKRSREQLEAEESENEELYREQEVEGEINYENGDGDNSMEGNTKKKKKRGSTLCLKIHARSLVDRQEITLNEEGEAIVPSQKIVSKFSNFLGSVARMSDLCPLTYTNWKAIPKKKKTIWAYVNKRYIVLEKGQKDVYAIINDAWRWYKWLIKKNHFTKYRNLCERLKNRPDSIPEAHFKKLMTYWSYEAIREISHQNAKNIDKQKWRHQAGPISFAVIRERLRATKDDREPPTQAEVFIETRQSKRGKQLDQVTSDAITNLQDLITNSDHSSVEAFQTVFGKEKPGRLRCYGRVTTSSLLKRNKVADMEKKHAAEVKSLTDKVQEMETIHRKDMAAMEEKLQVLLRVMLNQSNTGIDMGDLGAFLSTRNDDNNVRHSSTSNHESVMKLTVKTLKGSHFEIRVHPSDSIMAVKTTIEDIQGKDNYPCRQQLLIHNGKVLKDETTLADNEVSEDGFLVVMLSKVNNRSMGGECFVDNYEEEDEEHFFDESDEEDEEKFFDDLDGDEDEE* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0744 767 MobiDBLite consensus disorder prediction 166 188 - -
Mtr7g0744 767 MobiDBLite consensus disorder prediction 213 234 - -
Mtr7g0744 767 PANTHER TRANSPOSASE, PTTA/EN/SPM, PLANT-RELATED 200 620 - -
Mtr7g0744 767 ProSiteProfiles Ubiquitin domain profile. 646 724 IPR000626 GO:0005515
Mtr7g0744 767 SMART ubq_7 646 720 IPR000626 GO:0005515
Mtr7g0744 767 PANTHER OS10G0409366 PROTEIN-RELATED 200 620 - -
Mtr7g0744 767 SUPERFAMILY Ubiquitin-like 622 725 IPR029071 -
Mtr7g0744 767 Coils Coil 261 285 - -
Mtr7g0744 767 Pfam Ubiquitin family 648 721 IPR000626 GO:0005515
Mtr7g0744 767 MobiDBLite consensus disorder prediction 739 767 - -
Mtr7g0744 767 MobiDBLite consensus disorder prediction 203 305 - -
Mtr7g0744 767 Gene3D - 640 722 - -
Mtr7g0744 767 CDD Ubl_Rad23 646 719 - -
Mtr7g0744 767 MobiDBLite consensus disorder prediction 125 153 - -
Mtr7g0744 767 MobiDBLite consensus disorder prediction 125 146 - -
Mtr7g0744 767 Pfam Plant transposase (Ptta/En/Spm family) 436 557 IPR004252 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0744 Mtr-Chr7 11742564 11766918 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0744 646 719 Cytoplasmic Ribosomal Protein Gene Family AT3G62250 40.541 1.60e-06 47.0