Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0713 ATGGAAGAAATCAACAACACAGCAATGAACGTATCATCATCAACCAACAGCTTGTTATCTGATTTGGAAATGAACGAATACAATTTAATTGCTGAGGAATGCAACCCAAATTTCCTTATAGATGTGGAAGAGCTTCTTTCACATGACATAGCTAACGAAATCAATGAAACTTTTTCACCAAAACTTTCTTCTGACTCATCTTTTCAGTTTCAAATGCCATGTTTTGACAACAACCCAAATTCATCCACTACAGAAATGGAAAATATGAATCACTCAACTCAAACCTCAGACGAGTCATCGAGAAAAAGGTCTCGTGGTAATCATGGTCATGATCATATCATGGCTGAGAGAAAGAGAAGAGAGAAACTCACACAGAACTTCATTGCTCTTGCAGCTCTTGTTCCTAACCTTAAAAAGGTGGACAAGTATTCTGTGTTAGTTGACGCTATTAAATACTTGAAAGAGCTTAAAAAGCGTTTGGAAGAATTGGAAGAACAAAATGAGAAAACAAAGATAGAGTCACAAGTGATTGTGACCAAACCAGGCATCTACAGTGATGACAATTCCTCTACATGTGATGAGAGCATTCATAGTGTTGTTGGTTTACCATTTCAAGTGGAAGCAAGAGTCTTAGGGAAATATATACTGATTCGGATCCAATGCCAAGAGCACAAGGGGCTTATAGTTAAAATTATGGTCGAGATTCAAAGGTTTCAACTATTTGTTGTTAATGGTAGTGTTTTACCTTTTGGAGATTCTCTCATCGACGTTACCATCATTGCTCAGATGGATGAAGGCTACAACATGAGCATAAAGGAACTTGTGAAGAACCTACGCATGGCAGTATTGAAGTTTATGTCAACATAA 867 0.3725 MEEINNTAMNVSSSTNSLLSDLEMNEYNLIAEECNPNFLIDVEELLSHDIANEINETFSPKLSSDSSFQFQMPCFDNNPNSSTTEMENMNHSTQTSDESSRKRSRGNHGHDHIMAERKRREKLTQNFIALAALVPNLKKVDKYSVLVDAIKYLKELKKRLEELEEQNEKTKIESQVIVTKPGIYSDDNSSTCDESIHSVVGLPFQVEARVLGKYILIRIQCQEHKGLIVKIMVEIQRFQLFVVNGSVLPFGDSLIDVTIIAQMDEGYNMSIKELVKNLRMAVLKFMST* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0713 288 Coils Coil 146 180 - -
Mtr7g0713 288 PANTHER BASIC HELIX LOOP HELIX (BHLH) DNA-BINDING FAMILY PROTEIN 52 287 - -
Mtr7g0713 288 PANTHER BASIC HELIX LOOP HELIX (BHLH) DNA-BINDING FAMILY PROTEIN 6 54 - -
Mtr7g0713 288 Pfam Helix-loop-helix DNA-binding domain 112 156 IPR011598 GO:0046983
Mtr7g0713 288 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 111 177 IPR036638 GO:0046983
Mtr7g0713 288 MobiDBLite consensus disorder prediction 96 112 - -
Mtr7g0713 288 Gene3D - 92 173 IPR036638 GO:0046983
Mtr7g0713 288 PANTHER BHLH TRANSCRIPTION FACTOR 6 54 - -
Mtr7g0713 288 PANTHER BHLH TRANSCRIPTION FACTOR 52 287 - -
Mtr7g0713 288 SMART finulus 113 162 IPR011598 GO:0046983
Mtr7g0713 288 MobiDBLite consensus disorder prediction 69 95 - -
Mtr7g0713 288 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 107 156 IPR011598 GO:0046983
Mtr7g0713 288 MobiDBLite consensus disorder prediction 69 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0713 Mtr-Chr7 11017993 11021401 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0713 73 286 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 42.920 5.99e-50 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mtr7g0713 HLH 3.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0713 - - mtr:MTR_0250s0040 500.745