Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0700 ATGCCGGACGAAACAAGTTCGATCGACTACGCCATGGAAGCAGCATCTGGGCCCCACTTCTCCGGCCTCCGTCTCGACGGCGGCCGACTCTCATCTTCCCCAAAATCTTCTTTCTCTATCAATTCAATCCTTACCAAAGATTCTCTTCTCAATCAACCCTTTGTTATTGGTGTTTCCGGTGGAACTGCTTCTGGAAAAACCACTGTTTGTGATATGATCATTCAACAGCTTCATGATCATCGTGTTGTCCTTGTCAATCAGGATTCGTTTTATCGCGGGTTGAAACCGGAAGAGTTGGAACATGTTCATGAGTACAATTTTGATCATCCTGATGCTTTCGACACGGAGCAACTGCTGGAGTGTACGAAGAAGCTCATCAGTGGCCAAAGAGTCAAAATTCCCATTTACGACTTCAAGAAGCACCAACGCAGTTCTGATAGTTTTCGTCAGGTCAATGCCTCTGATGTCATTATATTGGAGGGAATTCTTGTATTCCATGATCAAGATGTTCGTGATCTGATGAACATGAAGATCTTTGTTGACACAGATGCTGATGTGAGGCTTGCTCGTAGAATTAGACGTGACACAGTGGAAAGGGGCAGAGACATAAACTCTGTTCTTGAAATGTATGCGAAGTTTGTTAAGCCTGCTTTCGATGACTTTGTTCTACCATCAAAGAAATATGCTGATGTGATCATTCCCCGTGGAGGTGATAATCATGTTGCCATCGATTTGATTACGCAACACATCCGCACCAAGCTTGGTCAACATGATCTATGCAAAATATATCCAAATGTTTATGTTATTCAATCTACATTCCAGATAAGGGGGATGCATACTTTGATTCGTGACAAAGAAATATCAAAGCATGATTTTGTATTTTACTCTGATCGACTTATTCGCCTGGTTGTTGAGCATGGTCTAGGTCACCTGCCTTTCACAGAAAAGCAAGTCGTCACTCCAACAGGATCTGTCTATACTGGTGTTGATTTCTGCAAGAAATTATGTGGTGTTTCAATTATTCGAAGTGGTGAGAGCATGGAAAATGCACTTCGTGCATGTTGTAAAGGCATTAAAATTGGAAAAATTCTGATTCACCGGGATGGAGATAATGGAAAACAGCTTATATATGAGAAGCTTCCCAAGGATATCTCGGAACGGCATGTCTTGCTTCTTGACCCTGTGCTTGCTACAGGTAACTCAGCCAACCAAGCAATTGAATTACTCATTCAAAAAGGAGTACCAGAATCCCACATTATATTCCTGAATCTCATTTCTGCTCCTGAGGGAATCCATTGTGTTTGTAAAAGGTTTCCATCATTGAAAATTGTCACATCTGAGATTGATGTTGCATTAAATGATGAGTTTCGTGTTATCCCTGGGTTGGGTGAATTTGGTGATCGCTACTTTGGCACCGATGATTGA 1425 0.4189 MPDETSSIDYAMEAASGPHFSGLRLDGGRLSSSPKSSFSINSILTKDSLLNQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLKPEELEHVHEYNFDHPDAFDTEQLLECTKKLISGQRVKIPIYDFKKHQRSSDSFRQVNASDVIILEGILVFHDQDVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEMYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLITQHIRTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDKEISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSVYTGVDFCKKLCGVSIIRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPKDISERHVLLLDPVLATGNSANQAIELLIQKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNDEFRVIPGLGEFGDRYFGTDD* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0700 474 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 246 IPR027417 -
Mtr7g0700 474 CDD UMPK 55 253 IPR000764 -
Mtr7g0700 474 Pfam Phosphoribulokinase / Uridine kinase family 55 241 IPR006083 GO:0005524|GO:0016301
Mtr7g0700 474 PANTHER URIDINE KINASE 35 471 - -
Mtr7g0700 474 Gene3D - 257 472 IPR029057 -
Mtr7g0700 474 CDD PRTases_typeI 330 445 IPR000836 -
Mtr7g0700 474 TIGRFAM udk: uridine kinase 53 253 IPR000764 -
Mtr7g0700 474 Gene3D - 50 256 IPR027417 -
Mtr7g0700 474 SUPERFAMILY PRTase-like 256 473 IPR029057 -
Mtr7g0700 474 PANTHER URIDINE KINASE-LIKE PROTEIN 2, CHLOROPLASTIC 35 471 IPR029930 GO:0004849|GO:0044206
Mtr7g0700 474 Pfam Uracil phosphoribosyltransferase 271 472 - -
Mtr7g0700 474 PRINTS Uridine kinase signature 53 70 - -
Mtr7g0700 474 PRINTS Uridine kinase signature 83 94 - -
Mtr7g0700 474 PRINTS Uridine kinase signature 128 143 - -
Mtr7g0700 474 PRINTS Uridine kinase signature 185 195 - -
Mtr7g0700 474 PRINTS Uridine kinase signature 199 210 - -
Mtr7g0700 474 PRINTS Uridine kinase signature 221 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0700 Mtr-Chr7 10830859 10837952 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0700 1 474 PRT Gene Family AT5G40870 85.300 0.0 834
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0700 K00876 - gmx:100780005 874.004