Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0693 ATGGGAGAGAGTTCTTTGAACCTTTTAGAAAGTGCAACAAAAAACATCAAAATGGAAGAAGAAGAAGAAGTTGAAAGAGAAGAAGAACAAGAAATAGATCCAGAAAGTAACAATCCATTAAACCAGAGATTGATCAAGAGGAGTAGAACACTATCATCAAGTCCACTTGCTCTTGTTGGTGAAAAAGTTTCCTACATAGAAAGCTTAGATTATGAGACTAATGAGAATGATCTATTCAAAGATGGTTGGAGAAGTAGATCAAGAATTGAAGTATTACAATACATATTCATGAAATGGGTGCTTGCATTTCTTGTTGGACTTCTCACTGGTATTATAGCTACTCTTATAAATCTTGCTGTTGAGAACATTGCTGGATACAAGTTTTTGGCTGTTCTTAAATTCATCAATAGAGAAAGGTACTTGGAAGGTTTCCTATATTTCATGGGAATTAATTTCGTTTTAACATTTGTTGCTGCTATTCTGTGTGTGTGTTTTGCACCCACAGCAGCTGGTCCTGGAATACCTGAAATCAAAGCTTATCTTAATGGTGTTGATACACCTAACATGTTTGGTGCTACAACAATGATTGTTAAGATAATTGGAAGCATTGGAGCTGTCTCTGCAGGCCTAGATCTTGGAAAAGAAGGACCCTTGGTACATATAGGAAGTTGCATAGCTTCCTTACTAGGCCAAGGAGGCCCTGACAATTACAAAGTCAAATGGCGCTGGCTGCGATATTTCAACAATGATCGTGACCGTCGGGATCTTATTACCTGTGGTGCATCTTCAGGAGTTTGTGCAGCGTTCAGGTCCCCTGTTGGTGGAGTTCTTTTTGCCCTTGAAGAGGTAGCAACCTGGTGGAGAAGTGCTCTTCTATGGAGAACCTTTTTTTGCACAGCTGTGGTGGTGGTAATTCTTAGGGCCTTCATTGAAATCTGCAACTCCGGGAAATGTGGCCTTTTCGGTGCAGGCGGGCTGATCATGTTTGATGTTAGCAATGTTACTGTTAGGTACCATGTGATGGATATCCTCCCTGTTGCAGTCATTGGAATCATAGGTGGATTATTGGGAAGCCTTTATAATCATCTTCTACACAAGGTCCTCAGACTCTACAATCTAATCAATCAGAAAGGAAAAATGCATAAACTCCTTCTCAGTCTTGCGGTAGTACTATTCACGTCAGCATGTCAATATGGTCTCCCGTTCCTAGCAAAATGCACCCCTTGTAATCCATCACTTCCAGAGTCAGAACTCTGCCCCACGAATGGAAGGTCTGGAAATTTCAAACAATTCAATTGCCCACCTGGCCACTACAACGATCTTGCTACTCTACTGCTTACGACTAATGACGATGCTGTTCGAAACATATTCTCAAGTAACACACCTCATGAATATCAAACCTCCTCCCTCTTAATTTTCTTTGCACTGTATTGCATATTAGGACTGATTACTTTCGGAATTGCTGTGCCGACTGGACTCTTCCTCCCAATCATCCTTATGGGCTCGGCTTACGGCCGCCTTGTTGGTATGTTAATGGGACCTCATACAAAAATTGACCAAGGACTGTTTGCTGTACTTGGTGCAGCCTCCCTCATGGCTGGTTCCATGAGGATGACTGTATCCCTTTGTGTGATTTTCCTTGAACTTACCAGCAATCTGCTTCTACTGCCAATAACAATGATTGTTCTCCTAATAGCCAAAACTGTTGGAGATTGCTTCAACCCAAGCATCTATGAGATTATACTGCATTTAAAAGGTCTTCCTTTCATGGATGCAAATCCTGAGTCATGGATGAGAAACCTCACTGTCGGCGAGCTTGTAGATGTAAAGCCAGCAGTGATTTCCCTCCAAGGAGTAGAAAAGGTATCCAAGATAGTAGATGTATTGAAAAATACTACACATAATGGTTTCCCGGTGATGGATGATGGGGTAGTGCCACCAGTAGGACAGGTCAATGGGGCAACGGAACTGCATGGACTAATTTTAAGAGCTCACCTTATCCAAGCATTAAAGAAGAGGTTCTTCTTGAAAGAGAGAAGAAGAACAGAGGAATGGGAAGTGAGAGAGAAATTTACCTGGGTAGAGCTGGCCGAGAGAGAAGGGAAAATTGAAGAGGTGGCTATAACAAGGGAAGAAATGGAGATGTTTGTTGATCTACATCCTCTCACCAATACAACTCCATTTACTGTGCTAGAGAGCATATCAGTTGCAAAGGCAATGATCCTCTTCAGGCAAGTTGGACTTCGTCATCTGCTTGTAGTTCCGAAATATCAGGCATCAGGGGTATGCCCTGTAATCGGGATATTGACCAGACAGGATCTACTGGCCTACAACATTCTGACGGTCTTTCCTCACCTGGCAAAATCTAAGAACAGACAGAAGAGAAATTGA 2391 0.4203 MGESSLNLLESATKNIKMEEEEEVEREEEQEIDPESNNPLNQRLIKRSRTLSSSPLALVGEKVSYIESLDYETNENDLFKDGWRSRSRIEVLQYIFMKWVLAFLVGLLTGIIATLINLAVENIAGYKFLAVLKFINRERYLEGFLYFMGINFVLTFVAAILCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTMIVKIIGSIGAVSAGLDLGKEGPLVHIGSCIASLLGQGGPDNYKVKWRWLRYFNNDRDRRDLITCGASSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFCTAVVVVILRAFIEICNSGKCGLFGAGGLIMFDVSNVTVRYHVMDILPVAVIGIIGGLLGSLYNHLLHKVLRLYNLINQKGKMHKLLLSLAVVLFTSACQYGLPFLAKCTPCNPSLPESELCPTNGRSGNFKQFNCPPGHYNDLATLLLTTNDDAVRNIFSSNTPHEYQTSSLLIFFALYCILGLITFGIAVPTGLFLPIILMGSAYGRLVGMLMGPHTKIDQGLFAVLGAASLMAGSMRMTVSLCVIFLELTSNLLLLPITMIVLLIAKTVGDCFNPSIYEIILHLKGLPFMDANPESWMRNLTVGELVDVKPAVISLQGVEKVSKIVDVLKNTTHNGFPVMDDGVVPPVGQVNGATELHGLILRAHLIQALKKRFFLKERRRTEEWEVREKFTWVELAEREGKIEEVAITREEMEMFVDLHPLTNTTPFTVLESISVAKAMILFRQVGLRHLLVVPKYQASGVCPVIGILTRQDLLAYNILTVFPHLAKSKNRQKRN* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0693 796 Gene3D Clc chloride channel 90 591 - -
Mtr7g0693 796 PANTHER CHLORIDE CHANNEL PROTEIN 23 791 - -
Mtr7g0693 796 CDD ClC_6_like 67 590 - -
Mtr7g0693 796 SMART cbs_1 612 671 IPR000644 -
Mtr7g0693 796 SMART cbs_1 726 779 IPR000644 -
Mtr7g0693 796 ProSiteProfiles CBS domain profile. 723 789 IPR000644 -
Mtr7g0693 796 CDD CBS_pair_voltage-gated_CLC_euk_bac 610 777 - -
Mtr7g0693 796 PRINTS Plant CLC chloride channel signature 72 80 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mtr7g0693 796 PRINTS Plant CLC chloride channel signature 283 291 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mtr7g0693 796 PRINTS Plant CLC chloride channel signature 297 307 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mtr7g0693 796 PRINTS Plant CLC chloride channel signature 315 322 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mtr7g0693 796 PRINTS Plant CLC chloride channel signature 441 457 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mtr7g0693 796 Coils Coil 9 30 - -
Mtr7g0693 796 SUPERFAMILY CBS-domain pair 594 777 IPR046342 -
Mtr7g0693 796 SUPERFAMILY Clc chloride channel 76 592 IPR014743 -
Mtr7g0693 796 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 23 791 - -
Mtr7g0693 796 Pfam CBS domain 725 777 IPR000644 -
Mtr7g0693 796 MobiDBLite consensus disorder prediction 1 39 - -
Mtr7g0693 796 Pfam Voltage gated chloride channel 155 570 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mtr7g0693 796 Gene3D - 592 782 IPR046342 -
Mtr7g0693 796 PRINTS Chloride channel signature 167 184 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mtr7g0693 796 PRINTS Chloride channel signature 198 217 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mtr7g0693 796 PRINTS Chloride channel signature 262 281 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mtr7g0693 796 PRINTS Chloride channel signature 489 509 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mtr7g0693 796 PRINTS Chloride channel signature 521 537 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mtr7g0693 796 PRINTS Chloride channel signature 539 558 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mtr7g0693 796 PRINTS Chloride channel signature 577 591 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0693 Mtr-Chr7 10682286 10687472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0693 33 790 Ion Channels AT3G27170 79.815 0.0 1243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0693 K05016 - gmx:100788620 1351.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g0693 7 10682286 10687472 Mtr6g0712 6 8604992 8611106 PCT