Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0688 ATGTCAGCCTCTCTTCCAACAAATCGCTTTTCCAAAAGCATCCACAATCAAACAATGAGTCGGAAAGAATTGTCAAAGATTTCACCGTCGCCGGTTTCATTGGCCACTCTCCTTGACCGTGAGCTTCGAGAAGAGAAAGGTGAAAAAAGGTTTGTTAAGTATGGAGAAGAAAGCATGACCAAGAAAGGAGAAGATTATGGTCTGATCAAAACATGTTGCCACCGGGTTCCCGGGGATCCATCAACTGCGTTTTCGGTCTTTGCAATTTTTGATGGGCATAGCGGTATATCAGCCGCAGTTTATGCAAAAGAAAACTTGCTAAATAATGTTTTGAAGGAAATACCGAAAGATATTATCAGCAGCAGCAGGGATGCTTGGCTACATGCCCTTCCTCGTGCTCTAGTGGCTGGTTTTGTGAAGACTGACATGGATTTTCAGAGTATCAAAGGAGAAATGTCTGGAACTACAGCTACGTTTGTTGTTGTTGATGAGAGTATTGTCACTGTTGCATCTGTTGGTGATTCGCGTTGCATATTAGTAGATAATAAAGGAGGAGGTGTAGTTTCTATTCTTACTGTTGATCACAGGCTGGAAGATAACGTGGAGGAGAGGGAGCGTGTTATTGCAAGTGGTGGTGAAGTTAAAAGACAAGATTATCGTGGTGGCCCTCTTCGCGTCTGGCCTGGTGGATTATGTCTATCTAGATCAATAGGAGACGCAGATCTAGGGAAATATATTGTTCCAATACCACATGTTAAGCAAGTCAAACTACTTTCCAATGGTGGCAATGGAAGGCTTATCATAGCCTCTGATGGTGTTTGGGATGCTTTATCGAATGAAATGGCAGCAGCAGCATGTCGGGGTGTAGCTGCAGAATTTGCTGCAAAGCTAGTGGTTGAGGAAGCTATAATATCTAAAGGCTTGAGAGATGATACATCATGCATTGTTGTAGATATTCCTTCTGATCACCTCCCTGTATTACAACGAAATTCAACTACACAAAAGAAATTACATAATCTTCTAAAACCGCTTCTTTTTCCTTTTCGAAAGAAATCTAAGAAGAACTCTACAAACAAAGCTACCAGCAAGGTTGGTGTTGTTGTGGAAGATTTATTTGAAGAGGGTTCTGTGTTTATAGAAAGGTTTGGCAATGATTTTTCACTTAATAACAACTCTGATCAGATTTTCAGCTGTGCGATTTGCCAAGTGGATCAACGCCCTGGAAATGGTATATCAAGACCGTTGAATTCTCCATTGGAAGTCCCATTTTTCTGCACAAACTGTCGGAAGAAAAAAGTTATAATGGAAGGAAAGAGGCCAATGGTCTATCAGTAG 1335 0.4135 MSASLPTNRFSKSIHNQTMSRKELSKISPSPVSLATLLDRELREEKGEKRFVKYGEESMTKKGEDYGLIKTCCHRVPGDPSTAFSVFAIFDGHSGISAAVYAKENLLNNVLKEIPKDIISSSRDAWLHALPRALVAGFVKTDMDFQSIKGEMSGTTATFVVVDESIVTVASVGDSRCILVDNKGGGVVSILTVDHRLEDNVEERERVIASGGEVKRQDYRGGPLRVWPGGLCLSRSIGDADLGKYIVPIPHVKQVKLLSNGGNGRLIIASDGVWDALSNEMAAAACRGVAAEFAAKLVVEEAIISKGLRDDTSCIVVDIPSDHLPVLQRNSTTQKKLHNLLKPLLFPFRKKSKKNSTNKATSKVGVVVEDLFEEGSVFIERFGNDFSLNNNSDQIFSCAICQVDQRPGNGISRPLNSPLEVPFFCTNCRKKKVIMEGKRPMVYQ* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0688 444 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 20 419 - -
Mtr7g0688 444 SMART PP2C_SIG_2 68 319 IPR001932 -
Mtr7g0688 444 SMART PP2C_4 41 317 IPR001932 -
Mtr7g0688 444 Gene3D - 56 324 IPR036457 -
Mtr7g0688 444 Pfam Protein phosphatase 2C 79 303 IPR001932 -
Mtr7g0688 444 CDD PP2Cc 61 319 IPR001932 -
Mtr7g0688 444 MobiDBLite consensus disorder prediction 1 27 - -
Mtr7g0688 444 SUPERFAMILY PP2C-like 61 320 IPR036457 -
Mtr7g0688 444 ProSiteProfiles PPM-type phosphatase domain profile. 65 319 IPR001932 -
Mtr7g0688 444 PANTHER ALPHABET, ISOFORM E-RELATED 20 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0688 Mtr-Chr7 10607198 10608685 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0688 19 440 PP2C-type Phosphatase Gene Family AT1G09160 57.895 2.11e-162 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0688 - - gmx:100800232 500.745