Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0682 ATTTTCATTCAAAAAATTGAAACAAATCCAAACTCATTTTCTTTGTCAGAATCACTTGTTCTTCTTCTTCTTTTTCTTCTTCTTCTTCTTGAACTAACCATGGAATTGGAAAATCAAAATCAGGATTCAAATTTTCCATTCTGGAAACCCATTTCTCGTAAGTTCCAACCTGATTCACCTTTCTTCGCTATCGGTAACCTCGAACGAGAACTTCTTGTCAAACAGGTTGCGTTGGAATTTGAATTAACACAAGAGAAGGAACAGCTTGAGGATTTTATACAAGAAGATGGAAGGGAAGTCTTCTGTCCCATTGCTGGGTGTGGAGCGCGTTTGGCTTCAATTGAGGATTTTGAAAATCACTATAATGCAAGACATACTGCATCCTGTTCTGTGTGTTCTAGAGTCTACCCCACATCACGTTTGCTCAGCCTACATGTATCCGAAGCTCATGATTCTTTCTTTCAGGCAAAAGTTGCTCGTGGCTATGACATGTATGAATGCTTAGTGGAAGGTTGCGGTTTGAAATTCAAAAGCTACAAAAGTAGGCAGCACCATCTAGTTGACAAGCATAAATTCCCGACGTCATTCGAGTTTTTCAAGAAGGCTCTTCCTTCAAAGAAACACAGGATAAAGTCTCAACGCAAAAAGCCTTCTCAAAAGGAGGATACTTCAGGAATGATGGAAGTGGAAAATGCAGCTATGGATGACCTCGTTTCAGCAGTATCTAGATTAAATACTTCAGACACCGCTCCTTCCTCTATCAGCTTTGGTCGCCGTAACACCAAAGGCATGTCATTTGTCCCTCGAGCTGTTCAGCGTGGGAAGGGATCTAACTCAGGCTCATCTGTTACTAAGAAATAA 861 0.4065 IFIQKIETNPNSFSLSESLVLLLLFLLLLLELTMELENQNQDSNFPFWKPISRKFQPDSPFFAIGNLERELLVKQVALEFELTQEKEQLEDFIQEDGREVFCPIAGCGARLASIEDFENHYNARHTASCSVCSRVYPTSRLLSLHVSEAHDSFFQAKVARGYDMYECLVEGCGLKFKSYKSRQHHLVDKHKFPTSFEFFKKALPSKKHRIKSQRKKPSQKEDTSGMMEVENAAMDDLVSAVSRLNTSDTAPSSISFGRRNTKGMSFVPRAVQRGKGSNSGSSVTKK* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0682 286 ProSitePatterns Zinc finger C2H2 type domain signature. 129 150 IPR013087 -
Mtr7g0682 286 SMART c2h2final6 127 150 IPR013087 -
Mtr7g0682 286 SMART c2h2final6 100 125 IPR013087 -
Mtr7g0682 286 SMART c2h2final6 165 190 IPR013087 -
Mtr7g0682 286 MobiDBLite consensus disorder prediction 272 286 - -
Mtr7g0682 286 MobiDBLite consensus disorder prediction 247 286 - -
Mtr7g0682 286 ProSitePatterns Zinc finger C2H2 type domain signature. 167 190 IPR013087 -
Mtr7g0682 286 PANTHER UNCHARACTERIZED 41 274 IPR039258 -
Mtr7g0682 286 MobiDBLite consensus disorder prediction 207 226 - -
Mtr7g0682 286 PANTHER ZINC FINGER PROTEIN 511 41 274 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0682 44 282 C2H2 Transcription Factor Family AT5G14140 63.158 3.25e-111 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr7g0682 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0682 - - mtr:MTR_7g029095 424.861