Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0667 ATGTGCAACAAGGGGAAGGAGAAGGTGAATGAAGAATCAGTAGCCAATTTGAAGACGGGTGAGAATCTGAACAATGAGAACAAGCGAAAGGCAATCGTGCTAGGAGAGTCCCATATTGAAACTCAGAATTCAAAGACTCCCAAAAAAGATGTTGCTGAAGAAGAATCAACTGATTCATCGAAAGAAATTTCTCCATTTCTTCTTTTTGGATTCATTGTTGATCTCAGGAAAGGAATTCAAAAAGCTTACTCATGTAAATTTTGTAGCAGAAAGTTCACGAGTCCACATGCATTAGGTGGCCATCAAAATTCTCACAAATTAGAGAGAAGTGTCAAAGAAAAGATCCAAGCTTTTAACAAAGCCTGGATAAATTACTCAAATGATAATCAAGGGATAAGTCTAAACAACATCCCTCCATTCCATATGGGGTGTGGATATCAATATCATGGATATAACAATATGATTCAGCATGCAGGGCCATCAAACTTTTATGCCGAGAATTTGTATGGTGCATTGCAGCATATTTCGGAGATAGATGAAGTGAACGAGGGAGATGCTGGTAGTGATGAATTTGATCAGGAAGACAAAGAGACTCAAGAGGAGGATGCATCCAAGATTGATTTAACCCTTAAGCTTTGA 639 0.3834 MCNKGKEKVNEESVANLKTGENLNNENKRKAIVLGESHIETQNSKTPKKDVAEEESTDSSKEISPFLLFGFIVDLRKGIQKAYSCKFCSRKFTSPHALGGHQNSHKLERSVKEKIQAFNKAWINYSNDNQGISLNNIPPFHMGCGYQYHGYNNMIQHAGPSNFYAENLYGALQHISEIDEVNEGDAGSDEFDQEDKETQEEDASKIDLTLKL* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0667 212 MobiDBLite consensus disorder prediction 42 57 - -
Mtr7g0667 212 PANTHER EXPRESSED PROTEIN 3 173 - -
Mtr7g0667 212 MobiDBLite consensus disorder prediction 1 57 - -
Mtr7g0667 212 ProSiteProfiles Zinc finger C2H2 type domain profile. 83 110 IPR013087 -
Mtr7g0667 212 ProSitePatterns Zinc finger C2H2 type domain signature. 85 105 IPR013087 -
Mtr7g0667 212 MobiDBLite consensus disorder prediction 182 212 - -
Mtr7g0667 212 MobiDBLite consensus disorder prediction 198 212 - -
Mtr7g0667 212 PANTHER ZINC FINGER PROTEIN JAGGED 3 173 IPR045320 GO:0003700
Mtr7g0667 212 Gene3D Classic Zinc Finger 73 135 - -
Mtr7g0667 212 MobiDBLite consensus disorder prediction 182 197 - -
Mtr7g0667 212 SUPERFAMILY beta-beta-alpha zinc fingers 80 110 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0667 Mtr-Chr7 10315056 10315694 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0667 81 212 C2H2 Transcription Factor Family AT5G57520 26.119 1.31e-09 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr7g0667 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0667 - - mtr:MTR_7g028915 437.187