Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0666 ATGATTTATAGTAGGTGTGCTGCTTGCAAGAGTCAAAGAAGAAGGTGCCCTCCTGATTGCATTTTCTCTCCATATTTCCCTCCCAATGATCCTCAAAGATTTTCTTCTGTTCACCGTATCTATGGTGGTAGCAATGTTGGAAAAATGCTTCAGCAATTGCCTCACTATGTACGACACCAAGCTGCAAATTCTATGTATTTAGAAGCACAATGTAGGGTTCAAGATCCTGTTTATGGATGTGTTGGGATTATCTCTAAATTATCTCAACAAATTCAAGATACAGAAGTTGAGTTGGCAAAAATAAAAACTCAGATTGCTTATCATAAACTCCATAATCAACAATTTGATTCTTAA 354 0.3644 MIYSRCAACKSQRRRCPPDCIFSPYFPPNDPQRFSSVHRIYGGSNVGKMLQQLPHYVRHQAANSMYLEAQCRVQDPVYGCVGIISKLSQQIQDTEVELAKIKTQIAYHKLHNQQFDS* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0666 117 Coils Coil 84 104 - -
Mtr7g0666 117 PANTHER LOB DOMAIN-CONTAINING PROTEIN 23-RELATED 1 114 - -
Mtr7g0666 117 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
Mtr7g0666 117 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
Mtr7g0666 117 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0666 Mtr-Chr7 10304068 10304731 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0666 5 106 AS2 family AT3G26660 67.647 9.89e-49 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mtr7g0666 LOB 3.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0666 - - mtr:MTR_7g028905 248.825