Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0665 ATGTGCAACAAGGGGAAGGATAAGGTGAATGAAGAGTCGGTAGCCAATTTGAAGATGATGGTGAATCAGAACAATGAGAAAAAGCGAAAGGCAATCATGCTGGAAGAGTCCGATGTTGAAACTCAGAATTCTAAGACCCCCCTAAAAGATGTTGCTGAAGAAGAATCAACTGATTCATCCAAAAAAATTTCTCCATTTCTTCTTTTTGGATTCATTGTTGATCACAGGAAAGCAATTAAAAATGCTTACTCATGCAAATTTTGTAGCAGAAAGTTCACTAGTCCACAGGCATTAGGTGGCCATCAAAGTTCTCACAAATTAGAGAGAAGTCTCAAAAAAATGATCCAAGGAATAAGTTTAAACACCATCACTCCATTCCATATGGGGTGTGGATATCAATGTTATGGATTTAACAATATGATTCAACATGGAGGGTCATCAAACTTATATGCAGGAAATTTGTATGGTGCATTTCAACATATTTCGGAGATAGATGAAGCGAATGAGGCTGATCAAAGCATGATGAGTCAAAAAGTTATTGTGTCTAAGATTGAAGTTGGAAAATTTTCAGAGGGAGGTGCTGTTAGTGATGAAGTTGATCGGGAAGACAAAGAGACTCAAGAGGAGGAAGCATCCAAGATTGATTTGACTCTTAAGCTTTGA 663 0.3756 MCNKGKDKVNEESVANLKMMVNQNNEKKRKAIMLEESDVETQNSKTPLKDVAEEESTDSSKKISPFLLFGFIVDHRKAIKNAYSCKFCSRKFTSPQALGGHQSSHKLERSLKKMIQGISLNTITPFHMGCGYQCYGFNNMIQHGGSSNLYAGNLYGAFQHISEIDEANEADQSMMSQKVIVSKIEVGKFSEGGAVSDEVDREDKETQEEEASKIDLTLKL* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0665 220 PANTHER EXPRESSED PROTEIN 3 159 - -
Mtr7g0665 220 Gene3D Classic Zinc Finger 53 122 - -
Mtr7g0665 220 MobiDBLite consensus disorder prediction 34 56 - -
Mtr7g0665 220 ProSitePatterns Zinc finger C2H2 type domain signature. 85 105 IPR013087 -
Mtr7g0665 220 PANTHER ZINC FINGER PROTEIN JAGGED 3 159 IPR045320 GO:0003700
Mtr7g0665 220 MobiDBLite consensus disorder prediction 194 220 - -
Mtr7g0665 220 Pfam C2H2-type zinc finger 82 106 - -
Mtr7g0665 220 SUPERFAMILY beta-beta-alpha zinc fingers 81 111 IPR036236 -
Mtr7g0665 220 ProSiteProfiles Zinc finger C2H2 type domain profile. 83 110 IPR013087 -
Mtr7g0665 220 MobiDBLite consensus disorder prediction 192 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0665 Mtr-Chr7 10294999 10295661 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0665 82 151 C2H2 Transcription Factor Family AT5G57520 40.260 3.45e-11 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr7g0665 zf-C2H2_6 2.2e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0665 - - mtr:MTR_7g022250 330.487