Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0654 ATGGATTGGGATTGGAAAGAGTTTGCTTGGGATCCATCTGGATTTGATGAGGAGTTGAAGAATGAAGGAGATTCAATGGATTTGAGGCTTGGTGATCAAGCTTCTGATTCATTGGAAAAATCAGTTCATGATTCAGGAAAGGAAGATTCAAAAGCTGTGTCATCGTCGTTGTCGCCTAGTGGATCGTTGAAAAGATCGCGTTTACAAAATGGATCGCAGAGTATGATTTGCTCGGTTGATGGATGTAACTCTGATCTTAGTGATTGTAGAGAGTATCATAAGCGTCATAGGGTGTGCGAAAAGCATTCCAAAACTCCTGTTGTGTTGGTTGGAGGTAAGCAGCAGAGGTTCTGCCAACAATGCAGCAGGTTTCATTCACTTGCGGAGTTTGATGATGTTAAGAGGAGTTGCAGGAAACGTCTTGATGGACATAATAAGCGCAGAAGGAAACCTCAGCCACCTTCTCTTTTCATGGCTGCTGAGAAGTTCATGTACAATTACAAAGGACCTAGAATCCTGCACTTTGGTAGCCCTCAGACATATGTGAATCCTATTATGAGAAACATTTGGCCTGCGACTTCCATAACTGAAGCTGAATCTGGTTACGATCATCAAAGACTTTTGTATCGAATTGACAAACATAAACAGGATAAGGGACATCCTCATTGGCAAGAAATTCTCCCTAAATCTGGCGATGTTAACAAAGCAGCGCCTGGAACTCCTATCAGCCATCCTATCCGCGGTGCCGTTGGTTCATCCGCAGGTGAAAAAGGCGGTAGGAAGCTCTCTTCTGATGGCAAGCCCGGATCTTTTGACTCGGGTTGTGCTCTCTATCTTCTGTCAACACTTCAAACACAAAGCTCAGAGTTGAGTTTGATGCAGTCAAGCATCAACAGTCCAACACAATCTTCGTCTGGAACGTTGCATTTTGATGCTACAAAGGAGTACTCTTACTCCGGAAAGGTGAAGGATAAGCCGAATGGTCCGGTATTTGTTCTAGATGGAAACACAACAAACCTTCATTGCAATGGGATGCTGCAAATGGGTCCTAATGGATTGATCGAAAACGATAACTCAATGACTCTTCCATTCTTCTGGGAGTAA 1104 0.4357 MDWDWKEFAWDPSGFDEELKNEGDSMDLRLGDQASDSLEKSVHDSGKEDSKAVSSSLSPSGSLKRSRLQNGSQSMICSVDGCNSDLSDCREYHKRHRVCEKHSKTPVVLVGGKQQRFCQQCSRFHSLAEFDDVKRSCRKRLDGHNKRRRKPQPPSLFMAAEKFMYNYKGPRILHFGSPQTYVNPIMRNIWPATSITEAESGYDHQRLLYRIDKHKQDKGHPHWQEILPKSGDVNKAAPGTPISHPIRGAVGSSAGEKGGRKLSSDGKPGSFDSGCALYLLSTLQTQSSELSLMQSSINSPTQSSSGTLHFDATKEYSYSGKVKDKPNGPVFVLDGNTTNLHCNGMLQMGPNGLIENDNSMTLPFFWE* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0654 367 MobiDBLite consensus disorder prediction 238 267 - -
Mtr7g0654 367 MobiDBLite consensus disorder prediction 14 67 - -
Mtr7g0654 367 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 4 367 IPR044817 GO:0003677
Mtr7g0654 367 SUPERFAMILY SBT domain 75 156 IPR036893 GO:0003677|GO:0005634
Mtr7g0654 367 MobiDBLite consensus disorder prediction 51 67 - -
Mtr7g0654 367 ProSiteProfiles Zinc finger SBP-type profile. 74 151 IPR004333 GO:0003677
Mtr7g0654 367 Gene3D - 68 138 IPR036893 GO:0003677|GO:0005634
Mtr7g0654 367 Pfam SBP domain 77 150 IPR004333 GO:0003677
Mtr7g0654 367 MobiDBLite consensus disorder prediction 14 50 - -
Mtr7g0654 367 PANTHER TRANSCRIPTION FACTOR SBP FAMILY-RELATED 4 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0654 Mtr-Chr7 10175525 10179095 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0654 1 202 SBP-box Gene Family AT5G50670 42.489 1.38e-44 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mtr7g0654 SBP 9.6e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0654 - - lja:Lj1g3v3847150.1 545.043