Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0643 ATGAAGAACATTGCGTCGTTTGTAAGTCCTATAGGTGCTTCTATCAAATCTAGCACCACTACACAAAGCATGTCATCCATGGAACGCCTTGTTATTGAACTCAGCAATCCTGATCTCAGGGAAAATGCTCTTCGTGTTCTCTCCAAGTTTCAAAGGATCAGGTTATTTCCAGAACTTGCTCCTTTATTATGGAATTCTTATGGTACTATTGCAATACTTGTACAGGAAATAACTTCAATATATCCTACTATCCAACTGTTGAATCTTACTCAGACACAATCAACTCGAGTGTGCAATGTTCTGGCACTACTTCAGTGTGTGGCATCTCACCCTGATACAAAAATGTCATTTCTCAATGCTAGCATGCCTTTATATTTTTATCCATTCCTTCAAACAACAAGCGAGTTAGCCCAATTTGAGCATTTAAGACTTGCTAGTCTTGGAGTCATCGGTGCGTTGGTGAAGTCACAGGTTAACACCAAAGAAAGCATAGATTTTCTTCTTAGAAGTGAGATAATTCCACTATGCCTATGCAATATGGAAATCGGCAAAGAATTATCCAAAACTGTTGCAACATTTATAATTCAAAAAATTATGTCAAATGATGATGGTTTGATTTATATTTGTGGAACAGCAGAACGTTTTTTTGCAGTAGTTCAAGTTTTTAACATGGTATTGGAAAGTGTTGGCAATCAACCTTCACATCGATTGATGAAACTTCTGATTCCATGTTATTCTCTTTTGTCTCAACATCATAGGGCTTGCAATGCATTAAAAAGGCGACTTCCAAATATGCTGAAAACTGTCAATACCGTCAATTGCCTTCGCGAAGATGAAATAACTTGGAGTTGGGTAATGAAGTTGCATGAAAATATTGGGGTGAACCAGGTTCCCTTAGTACCAGGTGGTGGGAATCAATGA 921 0.3779 MKNIASFVSPIGASIKSSTTTQSMSSMERLVIELSNPDLRENALRVLSKFQRIRLFPELAPLLWNSYGTIAILVQEITSIYPTIQLLNLTQTQSTRVCNVLALLQCVASHPDTKMSFLNASMPLYFYPFLQTTSELAQFEHLRLASLGVIGALVKSQVNTKESIDFLLRSEIIPLCLCNMEIGKELSKTVATFIIQKIMSNDDGLIYICGTAERFFAVVQVFNMVLESVGNQPSHRLMKLLIPCYSLLSQHHRACNALKRRLPNMLKTVNTVNCLREDEITWSWVMKLHENIGVNQVPLVPGGGNQ* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0643 306 Pfam Cell differentiation family, Rcd1-like 30 292 - -
Mtr7g0643 306 PANTHER UNCHARACTERIZED 13 294 - -
Mtr7g0643 306 PANTHER CELL DIFFERENTIATION, RCD1-LIKE PROTEIN 13 294 - -
Mtr7g0643 306 SUPERFAMILY ARM repeat 35 211 IPR016024 -
Mtr7g0643 306 Gene3D - 19 293 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0643 Mtr-Chr7 9952621 9958691 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Mtr7g0643 Rcd1 7.2e-94 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0643 K12606 - mnt:21395687 328.176