Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0633 ATGGAGCATCACAGTGAAGGAAGTGTTTCTTCAGATACTCATAAAAGGAAGAAATGTTGCAACCGTCACACTTCTAATCAGATCCAAAGGCTTGAAGCGGTGTTTAAGACATGTTCATATCCTGATGAAAAACAAAGGTTGCAGTTAGGCAGGGAATTAGCCATGGATCCTACCAAGATCAAATTTTGGTTTCAGAATAGAAGGACTCAGTTGAAGACACAAAATGAAAGAGATGATAATTGTACACTCATACAAGAGAATGATAAAATAAGATCTCAGAATAAAGCTATGAGGGAAGCCCTTCAAAATGTTATCTGCAGCACTTGTGATGGACAAAAGTTGAGAATAGAAAATGCTCGACTCAAAGAAGAGCTTGTTAGAGTATCTAGCATTGCAGCTGGATACACTGGAAGTTCATCAACATTGCCAAATGTTCCTTACCAACCTGCTGGTCTCTCTCATAAGGAAAAATCACTAATGTTTGACATTGCTACAAATGCAATGCAAGAGCTGATTTTTCTTATGGAAACTAATGAGCCTCTTTGGATGAAATCAAACAATAATGGAAGAGATACTCTTAACCTTGAAACCTATGAAACAATGTTCCCTAGGACTAATAATCAGTTAAAGAATCCGAATATTCGCATCGAAGCTTCTAGAAAATCTGGTGATGTTATCATGAATGCCTTGACCTTGGTTGAAATGTTTATGGATCCTATTGATTTTGTAGAACAACACAAGTGGATGGAGCTATTTCCAACTATTGTGACAATCGCAAAGACTATTGAAGTTATATCTTCTCGAACGAAGGATGGTCTTGATGGTTCTTTGCAATTGATGTATGAAGAGTTGCAAGTGCTTTCACCACTTGTTCCTATTAGAGAATTCTACTTCCTACGTTATTGTAAACAATTTGAGGAAGGATGGGCAATAGTTGATGTTTCATATGAATTTCCTCATAACAAACATTTTGCTTCGAAATTTCGAGGCCATCGTCTTCCTTCCGGTTGCTTCATCCTCTTCATCCAAAACATGCCTAATGGAAAATCCAAGGTTACTTGGATTGAACATGTTGAAGTTGAAGACAGAAATCCAGTTCATATGCTCTATAGAAATGTTATCTATAGTGGAGTTGCATTTGGAGCTGAAAAATGGCTCACTACACTTCAAATAATGTGTGAAAGGATTGCTTCTTATCTTATGGATTCAGGTCATTCTACCGGTCATCTCGAAGGAGTGATTCCATCACCTGATGGAAAGAGGACCATGATGAAGCTAACACAAAGGATGGTAACTAATTTCTGTGAAAGTATAAATGGATCAGCTAGTCATAGATGGACCACATTATCAACTTTGAATGAGATTACTGTGAGGAAGAGTCAGCCTAATGGTGAGGTGCTAAGCGCATCTACTATCATTTGGCTGCCTCTTCCTCCACAGACTGTGTTCAATTTCTTGAACGATGAAAGGAAACGATCTCAGTCGAATGTACTTTCCAATGGTAATGATGTTCAAGAGGTTGTTCATATAGCAAATGTTTCGCGCCCTGGTAACTGCATTTCCGTGTTTAATGGTTTCAGCACAGGAAACAACAACATGTTGATATTACAAGAAAGTTGTGTGGATTCATCAGGTTCACTTGTGGTGTCTTGTCCTGTTGATTCATCAATAATGAGTGAGGTAGATCCTTCATACATTCAATTACTACCATCAGGTTTCATAATTACTTCTGATGGAAAGCAAAATGATAATAATATTCAAGGAGGTAATAGTGGTAATGATGATGTTGCATCAACAAGCTCAAACACAAACATTGGAGGATCATTGTTAACAGTTGCATTTCAAATTATGGTGAATAGTTTACCATCTAACATGGAGTCTGTTCCAGTTGTTAATGGACTTATTTGTAAGACTGTCGAACAAATAAAAGCTGCTTTGAATTGTCCTATGTAG 1953 0.3743 MEHHSEGSVSSDTHKRKKCCNRHTSNQIQRLEAVFKTCSYPDEKQRLQLGRELAMDPTKIKFWFQNRRTQLKTQNERDDNCTLIQENDKIRSQNKAMREALQNVICSTCDGQKLRIENARLKEELVRVSSIAAGYTGSSSTLPNVPYQPAGLSHKEKSLMFDIATNAMQELIFLMETNEPLWMKSNNNGRDTLNLETYETMFPRTNNQLKNPNIRIEASRKSGDVIMNALTLVEMFMDPIDFVEQHKWMELFPTIVTIAKTIEVISSRTKDGLDGSLQLMYEELQVLSPLVPIREFYFLRYCKQFEEGWAIVDVSYEFPHNKHFASKFRGHRLPSGCFILFIQNMPNGKSKVTWIEHVEVEDRNPVHMLYRNVIYSGVAFGAEKWLTTLQIMCERIASYLMDSGHSTGHLEGVIPSPDGKRTMMKLTQRMVTNFCESINGSASHRWTTLSTLNEITVRKSQPNGEVLSASTIIWLPLPPQTVFNFLNDERKRSQSNVLSNGNDVQEVVHIANVSRPGNCISVFNGFSTGNNNMLILQESCVDSSGSLVVSCPVDSSIMSEVDPSYIQLLPSGFIITSDGKQNDNNIQGGNSGNDDVASTSSNTNIGGSLLTVAFQIMVNSLPSNMESVPVVNGLICKTVEQIKAALNCPM* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0633 650 SUPERFAMILY Bet v1-like 156 397 - -
Mtr7g0633 650 SMART HOX_1 14 78 IPR001356 GO:0003677
Mtr7g0633 650 Gene3D - 163 390 IPR023393 -
Mtr7g0633 650 CDD homeodomain 15 75 IPR001356 GO:0003677
Mtr7g0633 650 ProSiteProfiles 'Homeobox' domain profile. 14 74 IPR001356 GO:0003677
Mtr7g0633 650 Gene3D - 3 88 - -
Mtr7g0633 650 CDD START_ArGLABRA2_like 157 394 - -
Mtr7g0633 650 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 9 647 IPR042160 -
Mtr7g0633 650 SMART START_1 162 395 IPR002913 GO:0008289
Mtr7g0633 650 Pfam Homeodomain 22 72 IPR001356 GO:0003677
Mtr7g0633 650 Pfam START domain 163 395 IPR002913 GO:0008289
Mtr7g0633 650 ProSiteProfiles START domain profile. 153 398 IPR002913 GO:0008289
Mtr7g0633 650 SUPERFAMILY Bet v1-like 417 622 - -
Mtr7g0633 650 MobiDBLite consensus disorder prediction 580 600 - -
Mtr7g0633 650 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG12-RELATED 9 647 - -
Mtr7g0633 650 SUPERFAMILY Homeodomain-like 10 76 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0633 Mtr-Chr7 9732929 9738743 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0633 12 649 Homeobox Transcription Factor Family AT1G73360 50.141 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mtr7g0633 START 1.4e-41 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0633 K09338 - gmx:100785023 798.119