Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g0620 ATGGCATCCAAATCCAGTACCCTCTCTGCCACATCACAAGATCAAGATGATTCTTCTTCCCACACAAAAGAGATTGTGAACATGAAGGAGAATGAAGATCAAGCTGCAAACTCCAACTCCATCAAGGCTACCGACTTCGTTAAGCTACCGCGAGACGATTCGGTTTCCAAGTTAAAGATGCATGAGGGAAGTGCTTTTAGACCTTATCAATCTGGTTCATCATCTTCTTTGCCTAATAAAAACAATGAAGGCAAAGAAGATGAGAACAAAAAACATCAATCCCCAAACACCAATTCCAACAAGTCTTTTGATTTCACAAAGCTATCAAAAGACCACTCGCTTTGCAAGTCGAAGGTGCAAGAGCATGGTTTCTTCAGCCCTATTCCAGCCGGTTCAACATCTCCTTTTCAACATAAGAACAACGAAGGAAAAGGAGATTCAAGGTCATTTTCATGCACCTATTGCAAGGCAAAATTTTCTACTGCACAAGCGTTGGGTGGGCACCAAAATGCCCATAGAAAGGAACGTGCATTTGAAAAGCAATGTCAACAAAGGTATGATCAAAATCCTTTAGGTTTGGGGCAACCTCCTTCTTTTAACCCTTATTTTAGTTATCGTAGTACTCTTTTTACACCTTATAATTATAGGCTACCCGGGGTTAGAATGGAATCAATGATTCAAAAACCACCTTATACTAGCGCCAAAATTACCCCACATAATGTCGGGTATGGTCATGGGACTTTGTGTTTGAATGATATATTGAACCCTTCTCTTGTTAGATCGAGAAATAATAGAGGGGCTGGAATTCTAGGGTTTGGTGGTGCAACTAGTTCAAAGATTGAAGATGGTAATAAAATTAGGGCTATTCTAAATTATGGAGATTCTTTTACAAATATTGCTTCATGTTCAAACTCAAACAAAGACAAGGAAATTATCGTGGCTCCTACTTCTACCGCTGATGATATTCATAATCAAGAGCCAAACAACGAAGAACACTCCGATTCAGAGCCAAACAACGAAGAAGACTCCGATTCAGAATCCTCTGAGCTTGATTTGTCACTCAAACTTTAA 1071 0.3959 MASKSSTLSATSQDQDDSSSHTKEIVNMKENEDQAANSNSIKATDFVKLPRDDSVSKLKMHEGSAFRPYQSGSSSSLPNKNNEGKEDENKKHQSPNTNSNKSFDFTKLSKDHSLCKSKVQEHGFFSPIPAGSTSPFQHKNNEGKGDSRSFSCTYCKAKFSTAQALGGHQNAHRKERAFEKQCQQRYDQNPLGLGQPPSFNPYFSYRSTLFTPYNYRLPGVRMESMIQKPPYTSAKITPHNVGYGHGTLCLNDILNPSLVRSRNNRGAGILGFGGATSSKIEDGNKIRAILNYGDSFTNIASCSNSNKDKEIIVAPTSTADDIHNQEPNNEEHSDSEPNNEEDSDSESSELDLSLKL* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g0620 356 MobiDBLite consensus disorder prediction 1 104 - -
Mtr7g0620 356 ProSitePatterns Zinc finger C2H2 type domain signature. 152 172 IPR013087 -
Mtr7g0620 356 PANTHER ZINC FINGER PROTEIN JAGGED 131 356 IPR045320 GO:0003700
Mtr7g0620 356 Pfam C2H2-type zinc finger 150 175 - -
Mtr7g0620 356 MobiDBLite consensus disorder prediction 1 16 - -
Mtr7g0620 356 MobiDBLite consensus disorder prediction 312 356 - -
Mtr7g0620 356 Gene3D Classic Zinc Finger 132 191 - -
Mtr7g0620 356 PANTHER ZINC FINGER PROTEIN KNUCKLES 131 356 - -
Mtr7g0620 356 SUPERFAMILY beta-beta-alpha zinc fingers 147 179 IPR036236 -
Mtr7g0620 356 ProSiteProfiles Zinc finger C2H2 type domain profile. 150 177 IPR013087 -
Mtr7g0620 356 MobiDBLite consensus disorder prediction 46 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g0620 Mtr-Chr7 9430911 9431981 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g0620 136 181 C2H2 Transcription Factor Family AT5G01860 50.000 1.52e-10 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr7g0620 zf-C2H2_6 1.7e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g0620 - - mtr:MTR_7g026977 645.195